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Os05g0432500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0167) R2 : 0.0289
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.129 (0.0351) R2dN8 : 0.0374 R2N8 : 0.0289
σ : 0.314
deviance : 45.19
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.97 0.239 10.2 0.121 0.355 0.258 0.0953 -2.38 0.0428 5.65 22.87 734 -- --
28.09 0.249 10.1 0.663 0.248 -0.204 0.364 -- 0.215 6.11 24.5 1012 -- --
25.99 0.237 10.2 0.115 0.358 0.264 -- -2.44 0.0402 5.69 22.96 732 -- --
28.41 0.25 10.1 0.668 0.248 -0.214 -- -- 0.215 6.03 24.5 1012 -- --
31.13 0.261 10.2 0.548 -- -0.237 -- -1.01 0.198 -- 23.08 1111 -- --
28.73 0.251 10.1 0.634 0.309 -- 0.401 -- 0.195 5.37 -- -- -- --
29.13 0.253 10.1 0.634 0.312 -- -- -- 0.193 5.25 -- -- -- --
31.12 0.261 10.1 0.694 -- -0.352 -- -- 0.233 -- 24.5 1012 -- --
31.78 0.263 10.2 -- 0.259 0.428 -- -- -0.0261 6.59 17.89 47067 -- --
34.2 0.273 10.2 0.645 -- -- -- -- 0.201 -- -- -- -- --
39.74 0.295 10.2 -- 0.323 -- -- -- 0.122 5.17 -- -- -- --
35.08 0.276 10.2 -- -- 0.511 -- -- -0.0237 -- 7.247 47520 -- --
45.19 0.314 10.2 -- -- -- -- -- 0.129 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.42 wind 9.0 43200 > th dose dependent rect. 14 16
2 25.44 wind 9.0 43200 > th dose independent rect. 17 6
4 25.46 wind 9.0 43200 < th dose independent rect. 17 6
6 25.49 wind 9.0 43200 > th dose dependent rect. 17 3
9 25.50 wind 9.0 43200 > th dose dependent rect. 14 10
15 25.53 wind 9.0 43200 > th dose dependent rect. 16 7
32 25.66 wind 9.0 43200 > th dose dependent rect. 16 14
34 25.67 wind 9.0 43200 < th dose independent rect. 17 1
38 25.69 wind 7.0 43200 > th dose dependent rect. 19 4
69 25.74 wind 9.0 43200 > th dose independent rect. 16 13
75 25.75 wind 9.0 43200 > th dose independent rect. 14 16
76 25.76 wind 9.0 43200 < th dose independent sin 15 NA
82 25.76 wind 9.0 43200 < th dose independent rect. 14 15
84 25.76 wind 9.0 43200 > th dose dependent sin 15 NA
91 25.78 wind 9.0 43200 < th dose independent rect. 17 12
95 25.79 wind 7.0 43200 > th dose independent rect. 19 1
98 25.79 wind 9.0 43200 < th dose independent rect. 14 10
99 25.79 wind 9.0 43200 > th dose independent rect. 14 11
115 25.81 wind 9.0 43200 > th dose independent sin 15 NA
124 25.81 temperature 30.0 720 < th dose dependent rect. 3 21
131 25.83 temperature 15.0 270 > th dose dependent rect. 17 18
133 25.84 temperature 30.0 1440 < th dose dependent rect. 17 4
156 25.87 temperature 10.0 1440 > th dose dependent rect. 17 4
166 25.88 temperature 30.0 1440 < th dose dependent rect. 17 2
198 25.90 temperature 10.0 1440 > th dose dependent rect. 11 11
227 25.92 temperature 30.0 1440 < th dose dependent rect. 11 11
235 25.93 temperature 30.0 1440 < th dose dependent rect. 20 1
260 25.94 temperature 10.0 1440 > th dose dependent rect. 20 1
278 25.95 wind 9.0 43200 < th dose independent rect. 10 19
303 25.96 temperature 25.0 720 < th dose independent rect. 3 22
330 25.97 precipitation 0.1 43200 > th dose dependent rect. 17 2
373 25.99 wind 9.0 43200 < th dose independent rect. 10 14
374 25.99 radiation 20.0 14400 > th dose independent rect. 17 14
404 26.00 humidity 70.0 14400 > th dose independent rect. 20 1
405 26.00 precipitation 0.1 43200 > th dose independent rect. 17 2
431 26.00 temperature 20.0 720 > th dose dependent rect. 6 18
434 26.00 temperature 15.0 270 > th dose dependent rect. 16 21
436 26.01 precipitation 0.1 43200 < th dose independent rect. 17 2
444 26.01 humidity 60.0 14400 < th dose dependent rect. 18 1
445 26.01 precipitation 0.1 43200 < th dose dependent rect. 17 2
469 26.02 humidity 70.0 14400 < th dose independent rect. 20 1
473 26.02 humidity 70.0 14400 > th dose independent rect. 20 7
496 26.02 wind 7.0 43200 > th dose dependent rect. 10 13
507 26.03 radiation 20.0 14400 > th dose independent rect. 6 1
528 26.03 temperature 10.0 1440 > th dose dependent sin 19 NA
576 26.04 temperature 25.0 720 < th dose independent rect. 12 21
579 26.04 temperature 30.0 1440 < th dose dependent sin 19 NA
583 26.04 temperature 25.0 270 > th dose dependent rect. 6 5
607 26.05 humidity 70.0 14400 > th dose independent rect. 20 5
619 26.05 humidity 70.0 14400 < th dose dependent rect. 20 1
669 26.06 temperature 30.0 720 < th dose dependent rect. 5 14
691 26.07 wind 9.0 43200 > th dose independent rect. 10 19
757 26.09 temperature 25.0 720 > th dose independent rect. 11 11
758 26.09 temperature 25.0 720 > th dose independent rect. 10 13
764 26.09 temperature 30.0 720 < th dose dependent sin 23 NA
795 26.09 temperature 30.0 720 < th dose dependent rect. 11 20
804 26.10 wind 9.0 43200 > th dose independent rect. 10 15
820 26.10 temperature 10.0 1440 > th dose dependent rect. 11 2
862 26.11 wind 7.0 43200 > th dose independent rect. 17 22
904 26.12 radiation 1.0 720 > th dose independent rect. 10 19
923 26.12 humidity 60.0 14400 < th dose dependent rect. 18 15
977 26.13 temperature 20.0 720 > th dose dependent rect. 22 23
978 26.14 wind 7.0 43200 > th dose independent rect. 9 6
986 26.14 temperature 20.0 720 < th dose independent rect. 5 18
988 26.14 wind 7.0 43200 > th dose independent rect. 19 20
992 26.14 wind 7.0 43200 < th dose independent rect. 17 22