Os05g0427900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0427900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.14 | 0.841 | 8.85 | -2.37 | 0.874 | 1.64 | -0.442 | -4.86 | -0.638 | 13.7 | 20.7 | 1335 | -- | -- |
| 336.76 | 0.855 | 8.68 | -1.03 | 0.895 | 1.55 | -0.117 | -- | -0.266 | 13.8 | 17.9 | 1305 | -- | -- |
| 320.65 | 0.834 | 8.84 | -2.38 | 0.855 | 1.64 | -- | -4.79 | -0.635 | 13.6 | 21 | 1339 | -- | -- |
| 336.37 | 0.854 | 8.68 | -1.05 | 0.898 | 1.82 | -- | -- | -0.266 | 13.7 | 15.7 | 1294 | -- | -- |
| 349.69 | 0.876 | 8.76 | -1.53 | -- | 1.84 | -- | -4.38 | -0.41 | -- | 21 | 1339 | -- | -- |
| 396.16 | 0.933 | 8.61 | -0.455 | 0.722 | -- | -0.241 | -- | 0.0759 | 13.7 | -- | -- | -- | -- |
| 396.39 | 0.932 | 8.61 | -0.463 | 0.722 | -- | -- | -- | 0.0745 | 13.7 | -- | -- | -- | -- |
| 353.63 | 0.88 | 8.68 | -0.9 | -- | 2.14 | -- | -- | -0.244 | -- | 15.7 | 1294 | -- | -- |
| 360.96 | 0.885 | 8.63 | -- | 0.922 | 1.33 | -- | -- | -0.0643 | 13.7 | 17 | 1237 | -- | -- |
| 428.18 | 0.967 | 8.62 | -0.492 | -- | -- | -- | -- | 0.0584 | -- | -- | -- | -- | -- |
| 402.04 | 0.938 | 8.6 | -- | 0.731 | -- | -- | -- | 0.126 | 13.7 | -- | -- | -- | -- |
| 373.75 | 0.903 | 8.65 | -- | -- | 1.77 | -- | -- | -0.113 | -- | 17 | 1237 | -- | -- |
| 434.58 | 0.973 | 8.6 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 308.50 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 2 | 310.21 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 3 | 310.56 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 4 | 310.59 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 5 | 311.04 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 8 | 311.90 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 9 | 311.92 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 22 | 312.64 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 29 | 313.35 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 36 | 313.86 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 37 | 313.96 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 39 | 314.13 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 64 | 314.66 | radiation | 30 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 66 | 314.97 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 72 | 315.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 104 | 315.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 125 | 315.88 | radiation | 40 | 43200 | > th | dose independent | sin | 10 | NA |
| 127 | 315.90 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 128 | 315.95 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 136 | 316.03 | humidity | 60 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 137 | 316.04 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 155 | 316.11 | radiation | 10 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 161 | 316.24 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 169 | 316.36 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 170 | 316.37 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 174 | 316.43 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 10 |
| 176 | 316.43 | radiation | 30 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 185 | 316.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 208 | 316.65 | radiation | 40 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 259 | 316.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 283 | 317.02 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 357 | 317.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 362 | 317.25 | radiation | 30 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 365 | 317.25 | radiation | 30 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 379 | 317.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 382 | 317.29 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 386 | 317.33 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 401 | 317.35 | radiation | 40 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 411 | 317.36 | radiation | 40 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 495 | 317.53 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 541 | 317.64 | radiation | 20 | 43200 | > th | dose dependent | sin | 9 | NA |
| 550 | 317.71 | temperature | 25 | 1440 | < th | dose independent | sin | 20 | NA |
| 552 | 317.71 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 573 | 317.75 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 595 | 317.81 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 793 | 318.11 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 815 | 318.14 | radiation | 10 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 843 | 318.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 847 | 318.21 | radiation | 40 | 43200 | < th | dose independent | sin | 7 | NA |
| 854 | 318.24 | temperature | 25 | 1440 | > th | dose independent | sin | 20 | NA |
| 855 | 318.24 | radiation | 30 | 43200 | < th | dose independent | sin | 9 | NA |
| 861 | 318.25 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 874 | 318.28 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 893 | 318.31 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 946 | 318.42 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 952 | 318.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 3 |