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Os05g0421300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.14 (0.0177) R2 : 0.0378
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.158 (0.0373) R2dN8 : 0.0488 R2N8 : 0.0378
σ : 0.334
deviance : 51.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.07 0.253 9.19 -0.699 0.442 0.637 -0.301 2.28 -0.23 7.29 0.8603 5622 -- --
32.35 0.265 9.13 -0.399 0.482 0.164 0.092 -- -0.178 7.77 37.06 2701 -- --
28.46 0.248 9.18 -0.668 0.43 0.692 -- 2.35 -0.238 7.63 0.004214 5644 -- --
32.19 0.264 9.13 -0.406 0.493 0.152 -- -- -0.179 7.9 58.36 2945 -- --
33.66 0.27 9.19 -0.508 -- 1.05 -- 2.4 -0.199 -- 5.798e-07 5292 -- --
33 0.269 9.14 -0.395 0.51 -- 0.069 -- -0.208 7.96 -- -- -- --
33.01 0.269 9.14 -0.393 0.51 -- -- -- -0.208 7.93 -- -- -- --
35.92 0.279 9.14 -0.348 -- 0.558 -- -- -0.138 -- 70.96 871 -- --
36.21 0.28 9.13 -- 0.484 0.152 -- -- -0.138 7.86 56.38 2850 -- --
47.18 0.321 9.15 -0.388 -- -- -- -- -0.201 -- -- -- -- --
37.08 0.285 9.13 -- 0.508 -- -- -- -0.164 7.99 -- -- -- --
36.33 0.281 9.14 -- -- 0.742 -- -- -0.129 -- 2.19 956 -- --
51.15 0.334 9.14 -- -- -- -- -- -0.158 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.99 humidity 90.0 14400 > th dose dependent rect. 2 4
15 27.36 humidity 90.0 14400 > th dose dependent rect. 1 10
55 27.69 humidity 70.0 43200 < th dose dependent rect. 23 9
63 27.74 humidity 50.0 43200 < th dose dependent rect. 4 6
82 27.83 humidity 50.0 43200 < th dose dependent rect. 8 2
87 27.85 humidity 50.0 43200 < th dose dependent rect. 19 15
94 27.89 humidity 90.0 14400 > th dose dependent sin 5 NA
100 27.92 humidity 90.0 14400 > th dose independent rect. 4 3
142 28.07 humidity 70.0 43200 < th dose independent rect. 24 7
150 28.14 temperature 15.0 14400 < th dose independent rect. 6 4
151 28.14 humidity 70.0 43200 > th dose independent rect. 24 7
159 28.17 wind 7.0 43200 > th dose independent rect. 18 1
165 28.21 temperature 15.0 14400 < th dose independent rect. 5 6
170 28.23 humidity 90.0 720 > th dose independent rect. 6 10
179 28.28 humidity 60.0 43200 < th dose independent rect. 22 11
192 28.33 humidity 90.0 1440 < th dose independent rect. 8 3
193 28.33 temperature 15.0 14400 > th dose independent rect. 6 5
199 28.35 temperature 15.0 14400 < th dose independent sin 1 NA
203 28.36 humidity 90.0 1440 < th dose independent rect. 9 1
204 28.36 humidity 90.0 1440 > th dose independent rect. 9 2
208 28.38 humidity 50.0 43200 < th dose dependent sin 10 NA
212 28.40 atmosphere 1015.0 1440 < th dose independent rect. 1 4
213 28.40 humidity 90.0 14400 > th dose independent rect. 1 7
215 28.40 temperature 15.0 14400 < th dose independent rect. 6 22
224 28.41 radiation 1.0 720 < th dose dependent rect. 5 8
238 28.43 temperature 15.0 14400 > th dose independent rect. 7 20
239 28.43 wind 1.0 14400 < th dose dependent rect. 5 1
240 28.43 radiation 1.0 720 < th dose dependent rect. 5 6
241 28.44 wind 7.0 43200 < th dose independent rect. 18 1
246 28.44 temperature 15.0 14400 < th dose independent rect. 5 9
273 28.47 humidity 60.0 43200 > th dose independent rect. 21 12
276 28.47 humidity 80.0 270 > th dose dependent rect. 7 4
300 28.50 humidity 90.0 1440 < th dose independent rect. 6 6
308 28.50 temperature 15.0 14400 < th dose independent rect. 24 23
316 28.51 wind 1.0 14400 < th dose independent rect. 5 1
317 28.51 humidity 90.0 14400 < th dose independent rect. 6 1
324 28.51 temperature 15.0 14400 > th dose independent rect. 6 10
328 28.51 humidity 80.0 270 > th dose dependent rect. 7 7
332 28.52 humidity 90.0 720 > th dose independent sin 2 NA
334 28.52 humidity 90.0 1440 > th dose independent rect. 6 6
341 28.52 temperature 15.0 14400 < th dose independent rect. 4 19
354 28.53 temperature 15.0 14400 < th dose independent rect. 2 21
357 28.53 temperature 15.0 14400 < th dose independent rect. 21 23
361 28.54 temperature 15.0 14400 > th dose independent sin 23 NA
367 28.54 temperature 15.0 14400 < th dose independent rect. 16 11
373 28.54 temperature 15.0 14400 < th dose independent rect. 15 22
380 28.55 temperature 15.0 14400 < th dose independent no NA NA
381 28.55 temperature 15.0 14400 < th dose independent rect. 18 9
407 28.56 temperature 15.0 14400 < th dose independent rect. 10 23
445 28.58 humidity 90.0 270 > th dose independent rect. 7 3
457 28.58 temperature 15.0 14400 < th dose independent rect. 24 20
482 28.60 temperature 15.0 14400 < th dose independent rect. 24 1
494 28.60 humidity 90.0 720 > th dose independent rect. 23 17
503 28.60 humidity 90.0 1440 > th dose dependent rect. 9 1
522 28.62 precipitation 0.1 1440 > th dose independent rect. 8 3
523 28.62 precipitation 0.1 1440 < th dose independent rect. 8 3
524 28.62 temperature 15.0 14400 < th dose independent rect. 22 4
531 28.62 temperature 15.0 14400 > th dose independent rect. 15 12
544 28.62 precipitation 0.1 1440 > th dose dependent rect. 8 3
545 28.62 precipitation 0.1 1440 < th dose dependent rect. 8 3
568 28.63 humidity 80.0 43200 > th dose dependent rect. 14 1
571 28.64 temperature 15.0 14400 < th dose independent sin 16 NA
578 28.64 humidity 90.0 1440 < th dose independent rect. 1 11
592 28.64 temperature 20.0 43200 < th dose dependent rect. 7 1
597 28.64 radiation 1.0 1440 < th dose dependent rect. 18 22
599 28.65 wind 1.0 14400 > th dose independent rect. 5 1
601 28.65 temperature 15.0 14400 > th dose independent rect. 18 9
623 28.66 temperature 15.0 14400 > th dose independent rect. 19 6
635 28.67 temperature 15.0 720 > th dose independent rect. 19 12
662 28.68 temperature 20.0 43200 < th dose dependent rect. 19 1
671 28.69 temperature 15.0 14400 > th dose independent rect. 21 6
694 28.69 temperature 20.0 43200 < th dose dependent rect. 6 15
698 28.70 temperature 15.0 14400 > th dose independent rect. 20 4
709 28.70 temperature 15.0 720 > th dose independent rect. 3 12
719 28.70 temperature 20.0 43200 < th dose dependent rect. 6 9
723 28.70 temperature 20.0 43200 < th dose dependent rect. 6 17
724 28.71 temperature 15.0 14400 > th dose independent sin 17 NA
732 28.71 humidity 90.0 14400 < th dose independent rect. 24 8
751 28.72 humidity 90.0 1440 < th dose independent sin 3 NA
769 28.72 temperature 20.0 43200 < th dose dependent sin 19 NA
772 28.72 atmosphere 1000.0 43200 > th dose dependent rect. 6 1
773 28.72 radiation 10.0 43200 > th dose dependent rect. 17 1
781 28.72 temperature 20.0 43200 < th dose dependent rect. 6 6
806 28.73 atmosphere 1005.0 43200 > th dose independent rect. 15 16
814 28.73 temperature 20.0 43200 < th dose dependent rect. 11 14
825 28.74 humidity 90.0 14400 > th dose independent rect. 23 2
842 28.74 temperature 20.0 43200 < th dose dependent rect. 15 8
861 28.74 radiation 1.0 1440 < th dose dependent rect. 18 17
865 28.75 temperature 15.0 43200 > th dose independent rect. 24 1
874 28.75 temperature 15.0 720 > th dose independent rect. 4 10
878 28.75 atmosphere 1005.0 43200 < th dose independent rect. 16 13
880 28.75 humidity 90.0 1440 < th dose independent rect. 1 14
889 28.75 atmosphere 1005.0 43200 > th dose independent rect. 11 20
892 28.75 temperature 20.0 43200 < th dose dependent rect. 17 6
961 28.77 humidity 90.0 14400 > th dose independent rect. 23 5
982 28.77 temperature 15.0 720 > th dose independent rect. 19 20
1000 28.78 atmosphere 1005.0 43200 > th dose independent sin 14 NA