Os05g0420200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF179 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0420200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF179 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.87 | 0.348 | 11.8 | -0.0315 | 0.726 | -0.881 | -0.015 | 1.92 | -0.457 | 21 | 90.62 | 272 | -- | -- |
| 60.72 | 0.363 | 11.8 | 0.0194 | 0.713 | -0.764 | -0.295 | -- | -0.434 | 20.9 | 90 | 300 | -- | -- |
| 54.87 | 0.345 | 11.8 | -0.031 | 0.726 | -0.882 | -- | 1.93 | -0.457 | 21 | 90.64 | 271 | -- | -- |
| 60.9 | 0.363 | 11.8 | 0.0322 | 0.702 | -0.784 | -- | -- | -0.439 | 21.2 | 89.69 | 300 | -- | -- |
| 77.51 | 0.41 | 11.8 | 0.00754 | -- | -1.14 | -- | 0.953 | -0.506 | -- | 85 | 473 | -- | -- |
| 71.02 | 0.395 | 11.8 | -0.0666 | 0.938 | -- | -0.592 | -- | -0.314 | 19.8 | -- | -- | -- | -- |
| 71.92 | 0.397 | 11.8 | -0.0532 | 0.936 | -- | -- | -- | -0.316 | 19.9 | -- | -- | -- | -- |
| 79.58 | 0.415 | 11.8 | 0.081 | -- | -1.14 | -- | -- | -0.492 | -- | 85 | 492 | -- | -- |
| 60.93 | 0.364 | 11.8 | -- | 0.703 | -0.78 | -- | -- | -0.441 | 21.2 | 89.72 | 300 | -- | -- |
| 119.6 | 0.511 | 11.7 | -0.0632 | -- | -- | -- | -- | -0.328 | -- | -- | -- | -- | -- |
| 71.99 | 0.397 | 11.8 | -- | 0.936 | -- | -- | -- | -0.31 | 19.9 | -- | -- | -- | -- |
| 79.75 | 0.416 | 11.8 | -- | -- | -1.14 | -- | -- | -0.501 | -- | 85 | 495 | -- | -- |
| 119.7 | 0.511 | 11.7 | -- | -- | -- | -- | -- | -0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.20 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 2 | 53.32 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 5 | 54.06 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 14 | 54.28 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 40 | 54.61 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 69 | 54.78 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 73 | 54.80 | humidity | 90.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 74 | 54.82 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 96 | 54.98 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 107 | 55.07 | humidity | 90.0 | 270 | > th | dose independent | sin | 8 | NA |
| 113 | 55.09 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 114 | 55.10 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 124 | 55.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 136 | 55.42 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 153 | 55.73 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 161 | 55.82 | wind | 5.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 173 | 55.92 | humidity | 90.0 | 270 | > th | dose independent | rect. | 20 | 13 |
| 179 | 55.98 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 23 | 6 |
| 180 | 55.98 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 181 | 55.99 | wind | 9.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 185 | 56.00 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 192 | 56.02 | humidity | 90.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 209 | 56.12 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 210 | 56.12 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 215 | 56.15 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 216 | 56.15 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 217 | 56.15 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 220 | 56.15 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 221 | 56.15 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 226 | 56.15 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 228 | 56.15 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 229 | 56.15 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 233 | 56.16 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 240 | 56.22 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 254 | 56.29 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 24 | 5 |
| 256 | 56.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 257 | 56.30 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 5 |
| 258 | 56.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 262 | 56.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 263 | 56.33 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 5 | 5 |
| 272 | 56.37 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 296 | 56.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 329 | 56.47 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 338 | 56.51 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 361 | 56.61 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 363 | 56.61 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 8 |
| 392 | 56.70 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 401 | 56.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 410 | 56.77 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 412 | 56.79 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 413 | 56.79 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 416 | 56.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 10 |
| 432 | 56.95 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 437 | 56.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 442 | 57.00 | wind | 9.0 | 10 | < th | dose dependent | rect. | 11 | 18 |
| 451 | 57.02 | wind | 9.0 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 477 | 57.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 492 | 57.16 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 494 | 57.17 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 497 | 57.19 | radiation | 1.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 507 | 57.22 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 512 | 57.26 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 525 | 57.33 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 3 |
| 527 | 57.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 529 | 57.34 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 541 | 57.38 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 545 | 57.38 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 550 | 57.40 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 553 | 57.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 558 | 57.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 564 | 57.46 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 565 | 57.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 577 | 57.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 580 | 57.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 582 | 57.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 2 |
| 583 | 57.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 585 | 57.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 589 | 57.51 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 599 | 57.53 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 11 |
| 605 | 57.55 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 13 |
| 610 | 57.56 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 616 | 57.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 621 | 57.60 | temperature | 25.0 | 270 | < th | dose independent | sin | 10 | NA |
| 626 | 57.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 627 | 57.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 628 | 57.61 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 631 | 57.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 632 | 57.61 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 640 | 57.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 642 | 57.61 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 658 | 57.64 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 677 | 57.70 | wind | 5.0 | 30 | < th | dose independent | rect. | 15 | 14 |
| 681 | 57.71 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 697 | 57.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 9 |
| 699 | 57.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 726 | 57.79 | humidity | 90.0 | 270 | > th | dose independent | rect. | 12 | 22 |
| 740 | 57.84 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 743 | 57.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 744 | 57.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 768 | 57.88 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 771 | 57.88 | wind | 5.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 786 | 57.90 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 797 | 57.93 | wind | 5.0 | 270 | < th | dose independent | rect. | 13 | 13 |
| 803 | 57.94 | wind | 9.0 | 10 | < th | dose dependent | rect. | 15 | 14 |
| 815 | 57.97 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 827 | 57.98 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 828 | 57.98 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 851 | 58.04 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 862 | 58.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 6 |
| 867 | 58.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 873 | 58.07 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 889 | 58.10 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 14 |
| 895 | 58.12 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 904 | 58.13 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 906 | 58.14 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 913 | 58.15 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 914 | 58.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 919 | 58.16 | radiation | 1.0 | 10 | < th | dose independent | sin | 9 | NA |
| 922 | 58.16 | wind | 7.0 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 933 | 58.19 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 943 | 58.20 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 950 | 58.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 951 | 58.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 952 | 58.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 955 | 58.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 956 | 58.21 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 969 | 58.21 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 984 | 58.23 | wind | 7.0 | 90 | < th | dose dependent | rect. | 15 | 13 |
| 987 | 58.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 990 | 58.24 | wind | 5.0 | 10 | < th | dose independent | rect. | 11 | 18 |
| 997 | 58.24 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |