Os05g0419600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0419600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.56 | 0.299 | 12.4 | -1.08 | 0.518 | -0.286 | 0.232 | -3.53 | -0.104 | 3.47 | 10.25 | 11252 | -- | -- |
| 51.49 | 0.334 | 12.2 | -0.395 | 0.495 | 0.233 | 0.138 | -- | 0.0833 | 3.63 | 4.525 | 3558 | -- | -- |
| 39.95 | 0.294 | 12.4 | -0.961 | 0.518 | -0.446 | -- | -3.57 | -0.0712 | 3.49 | 10.31 | 17561 | -- | -- |
| 51.55 | 0.334 | 12.2 | -0.399 | 0.495 | 0.234 | -- | -- | 0.0822 | 3.66 | 4.416 | 3576 | -- | -- |
| 54.58 | 0.344 | 12.4 | -0.933 | -- | -0.428 | -- | -3.57 | -0.0735 | -- | 10.51 | 19044 | -- | -- |
| 52.42 | 0.339 | 12.2 | -0.298 | 0.503 | -- | 0.143 | -- | 0.128 | 3.53 | -- | -- | -- | -- |
| 52.48 | 0.339 | 12.2 | -0.301 | 0.504 | -- | -- | -- | 0.127 | 3.56 | -- | -- | -- | -- |
| 63.99 | 0.374 | 12.2 | -0.201 | -- | -0.431 | -- | -- | 0.198 | -- | 10.51 | 19044 | -- | -- |
| 52.45 | 0.339 | 12.2 | -- | 0.358 | -0.393 | -- | -- | 0.177 | 3.85 | 25.5 | 72 | -- | -- |
| 66.66 | 0.382 | 12.2 | -0.28 | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
| 54.87 | 0.346 | 12.2 | -- | 0.498 | -- | -- | -- | 0.16 | 3.56 | -- | -- | -- | -- |
| 56.57 | 0.35 | 12.2 | -- | -- | -0.671 | -- | -- | 0.21 | -- | 24.9 | 70 | -- | -- |
| 68.72 | 0.387 | 12.2 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.04 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 12 | 39.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 18 | 39.24 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 32 | 39.39 | temperature | 25 | 14400 | < th | dose dependent | sin | 1 | NA |
| 35 | 39.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 40 | 39.42 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 13 |
| 44 | 39.42 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 49 | 39.43 | temperature | 25 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 90 | 39.49 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 95 | 39.50 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 117 | 39.52 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 122 | 39.52 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 17 |
| 124 | 39.52 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 19 |
| 134 | 39.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 198 | 39.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 273 | 39.64 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 332 | 39.68 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 337 | 39.68 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 358 | 39.70 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 373 | 39.71 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 374 | 39.71 | temperature | 25 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 383 | 39.72 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 384 | 39.72 | temperature | 25 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 397 | 39.73 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 403 | 39.73 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 404 | 39.73 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 405 | 39.73 | temperature | 25 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 406 | 39.73 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 23 |
| 429 | 39.75 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 434 | 39.75 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 447 | 39.76 | temperature | 20 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 540 | 39.82 | temperature | 20 | 14400 | > th | dose independent | sin | 15 | NA |
| 541 | 39.82 | temperature | 20 | 14400 | < th | dose independent | sin | 15 | NA |
| 589 | 39.85 | temperature | 20 | 14400 | > th | dose independent | rect. | 7 | 20 |
| 605 | 39.86 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 607 | 39.86 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 21 |
| 608 | 39.86 | temperature | 20 | 14400 | > th | dose independent | rect. | 7 | 22 |
| 658 | 39.89 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 18 |
| 739 | 39.93 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 748 | 39.93 | temperature | 20 | 14400 | < th | dose independent | rect. | 7 | 22 |
| 763 | 39.94 | temperature | 20 | 14400 | < th | dose independent | rect. | 7 | 20 |
| 811 | 39.96 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 853 | 39.97 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 21 |
| 887 | 39.98 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 913 | 40.00 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 988 | 40.02 | temperature | 10 | 14400 | > th | dose dependent | rect. | 8 | 1 |