Os05g0414600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0414600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.78 | 0.256 | 11.8 | -0.937 | 0.777 | -0.519 | 0.411 | 0.0836 | -0.167 | 23.9 | 25.46 | 336 | -- | -- |
| 29.79 | 0.254 | 11.8 | -0.923 | 0.776 | -0.524 | 0.413 | -- | -0.161 | 23.8 | 25.26 | 337 | -- | -- |
| 30.48 | 0.257 | 11.8 | -0.96 | 0.78 | -0.507 | -- | 0.153 | -0.164 | 23.7 | 24.97 | 320 | -- | -- |
| 30.51 | 0.257 | 11.8 | -0.936 | 0.774 | -0.522 | -- | -- | -0.157 | 23.7 | 24.8 | 335 | -- | -- |
| 56.98 | 0.352 | 11.8 | -0.974 | -- | -0.968 | -- | -0.267 | -0.23 | -- | 28.8 | 834 | -- | -- |
| 33.82 | 0.273 | 11.8 | -0.788 | 0.766 | -- | 0.38 | -- | -0.0536 | 23.5 | -- | -- | -- | -- |
| 34.43 | 0.275 | 11.8 | -0.803 | 0.764 | -- | -- | -- | -0.0548 | 23.4 | -- | -- | -- | -- |
| 57 | 0.352 | 11.8 | -1.05 | -- | -0.926 | -- | -- | -0.241 | -- | 29 | 857 | -- | -- |
| 51.19 | 0.333 | 11.8 | -- | 0.769 | -0.134 | -- | -- | 0.019 | 23.4 | 23.3 | 155 | -- | -- |
| 71.06 | 0.394 | 11.8 | -0.783 | -- | -- | -- | -- | -0.047 | -- | -- | -- | -- | -- |
| 51.43 | 0.335 | 11.8 | -- | 0.756 | -- | -- | -- | 0.0346 | 23.3 | -- | -- | -- | -- |
| 81.13 | 0.421 | 11.7 | -- | -- | 0.527 | -- | -- | 0.128 | -- | 29.4 | 817 | -- | -- |
| 87.24 | 0.436 | 11.7 | -- | -- | -- | -- | -- | 0.0399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.80 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 7 | 28.03 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 9 | 28.04 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 24 | 28.11 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 91 | 28.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 99 | 28.61 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 107 | 28.62 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 118 | 28.73 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 125 | 28.77 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 135 | 28.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 16 |
| 146 | 28.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 160 | 28.97 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 162 | 28.98 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 165 | 28.99 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 166 | 28.99 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 177 | 29.02 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 192 | 29.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 194 | 29.06 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 208 | 29.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 210 | 29.11 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 211 | 29.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 216 | 29.13 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 218 | 29.13 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 237 | 29.21 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 243 | 29.22 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 298 | 29.33 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 300 | 29.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 305 | 29.34 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 336 | 29.36 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 339 | 29.37 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 343 | 29.37 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 411 | 29.43 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 428 | 29.44 | atmosphere | 1015.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 453 | 29.45 | atmosphere | 1015.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 483 | 29.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 508 | 29.46 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 510 | 29.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 521 | 29.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 523 | 29.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 530 | 29.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 549 | 29.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 560 | 29.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 595 | 29.48 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 599 | 29.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 656 | 29.50 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 743 | 29.51 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 746 | 29.51 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 810 | 29.53 | atmosphere | 1015.0 | 43200 | < th | dose independent | no | NA | NA |
| 874 | 29.53 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 885 | 29.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 939 | 29.55 | atmosphere | 1015.0 | 43200 | > th | dose independent | no | NA | NA |