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Os05g0414100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0128) R2 : 0.647
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.962 (0.0333) R2dC : 0.648 R2C : 0.647
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0089 (0.0269) R2dN8 : 0.000109 R2N8 : -0.00102
σ : 0.241
deviance : 26.59
__
_____
C
peak time of C : 4.96
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.15 0.216 10.6 -0.249 0.912 -0.298 -0.308 0.0183 -0.00766 5.81 20.24 37 -- --
21.14 0.214 10.6 -0.248 0.913 -0.299 -0.31 -- -0.00669 5.82 20.09 37 -- --
21.37 0.215 10.6 -0.251 0.911 -0.301 -- 0.0295 -0.0058 5.83 20.08 37 -- --
21.38 0.215 10.6 -0.25 0.91 -0.301 -- -- -0.00575 5.84 20.09 37 -- --
25.2 0.234 10.6 -0.286 -- -1.05 -- 0.118 0.0574 -- 0.17 621 -- --
24.23 0.231 10.6 -0.285 0.969 -- -0.298 -- -0.0243 4.96 -- -- -- --
24.46 0.232 10.6 -0.285 0.967 -- -- -- -0.0228 4.95 -- -- -- --
25.16 0.234 10.6 -0.206 -- -1.09 -- -- 0.0447 -- 0.2395 620 -- --
23 0.223 10.6 -- 0.905 -0.322 -- -- 0.0235 5.91 20.02 37 -- --
73.7 0.401 10.6 -0.249 -- -- -- -- 0.00202 -- -- -- -- --
26.59 0.241 10.6 -- 0.962 -- -- -- 0.0089 4.96 -- -- -- --
25.8 0.237 10.6 -- -- -1.1 -- -- 0.0364 -- 0.008761 635 -- --
75.34 0.405 10.6 -- -- -- -- -- 0.0297 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.58 radiation 20.0 270 < th dose dependent rect. 2 17
2 18.73 humidity 80.0 270 > th dose independent rect. 2 7
3 18.76 humidity 60.0 270 > th dose dependent rect. 2 7
5 18.77 radiation 40.0 270 < th dose dependent rect. 2 7
12 18.86 humidity 70.0 270 > th dose dependent rect. 2 17
15 18.88 radiation 1.0 270 > th dose independent rect. 7 9
28 18.99 precipitation 0.1 270 < th dose independent rect. 20 6
29 18.99 radiation 20.0 270 < th dose independent rect. 2 7
30 18.99 humidity 80.0 270 > th dose independent rect. 2 16
31 18.99 precipitation 0.1 270 < th dose independent rect. 2 18
32 18.99 precipitation 0.1 270 < th dose dependent rect. 20 6
33 18.99 precipitation 0.1 270 < th dose dependent rect. 2 18
35 19.00 radiation 40.0 30 < th dose dependent rect. 5 16
36 19.01 wind 9.0 270 < th dose independent rect. 20 6
37 19.01 radiation 1.0 270 < th dose independent rect. 3 16
39 19.02 temperature 10.0 270 > th dose independent rect. 20 6
40 19.02 temperature 30.0 270 < th dose independent rect. 20 6
41 19.02 humidity 50.0 270 > th dose independent rect. 20 6
44 19.02 atmosphere 995.0 270 > th dose independent rect. 20 6
45 19.02 radiation 1.0 270 < th dose independent rect. 20 6
51 19.02 temperature 10.0 270 > th dose independent rect. 2 18
52 19.02 atmosphere 1015.0 270 < th dose independent rect. 2 18
53 19.02 wind 9.0 270 < th dose dependent rect. 20 6
54 19.02 radiation 1.0 270 < th dose dependent rect. 20 6
61 19.03 humidity 50.0 270 > th dose independent rect. 8 18
64 19.04 radiation 40.0 10 < th dose independent rect. 5 16
68 19.06 wind 9.0 270 < th dose independent rect. 19 8
70 19.06 precipitation 0.1 270 < th dose independent rect. 3 16
71 19.06 humidity 50.0 270 > th dose dependent rect. 20 6
73 19.06 precipitation 0.1 270 < th dose dependent rect. 3 16
74 19.07 temperature 10.0 270 > th dose independent rect. 19 8
75 19.07 temperature 30.0 270 < th dose independent rect. 19 8
76 19.07 humidity 50.0 270 > th dose independent rect. 19 8
77 19.07 atmosphere 995.0 270 > th dose independent rect. 19 8
78 19.07 radiation 1.0 270 < th dose independent rect. 19 8
83 19.07 temperature 10.0 270 > th dose independent rect. 3 16
84 19.07 atmosphere 1015.0 270 < th dose independent rect. 3 16
85 19.07 radiation 1.0 270 < th dose dependent rect. 19 8
97 19.11 precipitation 0.1 270 < th dose independent rect. 19 8
99 19.11 precipitation 0.1 270 < th dose dependent rect. 19 8
106 19.13 wind 1.0 270 > th dose independent rect. 13 8
107 19.13 wind 9.0 270 < th dose independent rect. 7 8
109 19.13 radiation 1.0 30 < th dose dependent rect. 21 9
117 19.15 atmosphere 995.0 270 > th dose independent rect. 2 18
132 19.16 radiation 30.0 270 < th dose independent rect. 15 16
147 19.17 radiation 40.0 270 < th dose dependent rect. 15 16
150 19.18 wind 9.0 270 < th dose independent rect. 2 18
156 19.20 temperature 15.0 270 > th dose independent rect. 7 8
159 19.20 precipitation 0.1 270 < th dose independent rect. 7 8
161 19.20 precipitation 0.1 270 < th dose dependent rect. 7 8
168 19.21 radiation 1.0 10 < th dose independent rect. 21 9
171 19.21 wind 9.0 270 < th dose independent rect. 21 16
178 19.22 atmosphere 1015.0 270 < th dose independent rect. 7 8
180 19.22 temperature 10.0 270 > th dose independent rect. 15 16
204 19.26 atmosphere 1010.0 270 < th dose independent rect. 13 8
205 19.26 humidity 50.0 270 > th dose independent rect. 7 9
206 19.26 precipitation 0.1 270 < th dose independent rect. 15 16
208 19.26 precipitation 0.1 270 < th dose dependent rect. 15 16
222 19.27 wind 9.0 270 < th dose independent rect. 15 16
239 19.28 wind 9.0 270 < th dose independent rect. 3 16
248 19.30 precipitation 0.1 270 < th dose independent rect. 2 6
249 19.30 atmosphere 995.0 270 > th dose independent rect. 7 8
254 19.30 precipitation 0.1 270 < th dose dependent rect. 2 6
257 19.31 wind 7.0 270 < th dose independent rect. 2 6
261 19.31 atmosphere 995.0 270 > th dose independent rect. 3 16
266 19.32 temperature 10.0 270 > th dose independent rect. 13 8
272 19.32 temperature 10.0 270 > th dose independent rect. 21 16
273 19.32 atmosphere 995.0 270 > th dose independent rect. 21 16
282 19.33 wind 9.0 270 < th dose independent rect. 8 18
300 19.35 atmosphere 995.0 270 > th dose independent rect. 15 16
330 19.38 radiation 20.0 30 < th dose independent rect. 5 16
343 19.39 wind 9.0 270 < th dose independent rect. 13 8
344 19.39 temperature 30.0 270 < th dose independent rect. 1 8
351 19.40 temperature 10.0 270 > th dose independent rect. 2 6
353 19.40 temperature 30.0 270 < th dose independent rect. 2 6
354 19.40 humidity 50.0 270 > th dose independent rect. 2 6
356 19.40 atmosphere 995.0 270 > th dose independent rect. 2 6
357 19.40 atmosphere 1015.0 270 < th dose independent rect. 2 6
361 19.40 temperature 10.0 270 > th dose independent rect. 8 18
362 19.40 precipitation 0.1 270 < th dose independent rect. 8 18
365 19.40 precipitation 0.1 270 < th dose dependent rect. 8 18
398 19.43 wind 7.0 270 < th dose independent rect. 1 8
410 19.45 precipitation 0.1 270 < th dose independent rect. 1 8
412 19.45 wind 1.0 270 > th dose independent rect. 15 15
416 19.45 precipitation 0.1 270 < th dose dependent rect. 1 8
419 19.46 precipitation 0.1 270 < th dose independent rect. 13 8
424 19.46 precipitation 0.1 270 < th dose dependent rect. 13 8
430 19.47 precipitation 0.1 270 < th dose independent rect. 21 16
432 19.47 precipitation 0.1 270 < th dose dependent rect. 21 16
444 19.49 wind 9.0 270 < th dose independent rect. 9 16
446 19.49 wind 1.0 270 > th dose independent rect. 2 18
451 19.50 humidity 50.0 270 > th dose independent rect. 21 16
464 19.52 humidity 80.0 270 < th dose independent rect. 7 7
552 19.57 wind 9.0 10 < th dose independent rect. 21 8
553 19.57 temperature 10.0 270 > th dose independent rect. 1 8
556 19.57 atmosphere 995.0 270 > th dose independent rect. 1 8
557 19.57 atmosphere 995.0 270 > th dose independent rect. 13 8
558 19.57 atmosphere 1015.0 270 < th dose independent rect. 1 8
559 19.57 temperature 10.0 270 > th dose independent rect. 9 16
575 19.59 precipitation 0.1 270 < th dose independent rect. 9 16
581 19.59 precipitation 0.1 270 < th dose dependent rect. 9 16
585 19.60 temperature 10.0 10 > th dose independent rect. 21 8
586 19.60 temperature 30.0 10 < th dose independent rect. 21 8
588 19.60 humidity 50.0 10 > th dose independent rect. 21 8
591 19.60 atmosphere 995.0 10 > th dose independent rect. 21 8
598 19.60 temperature 10.0 10 > th dose independent rect. 5 16
600 19.60 atmosphere 1015.0 10 < th dose independent rect. 5 16
617 19.61 wind 9.0 270 < th dose dependent rect. 21 4
629 19.62 wind 9.0 270 < th dose dependent rect. 2 6
670 19.65 radiation 1.0 270 < th dose independent sin 1 NA
693 19.66 radiation 10.0 270 > th dose independent sin 3 NA
703 19.66 temperature 10.0 270 > th dose dependent rect. 7 7
704 19.66 humidity 50.0 10 > th dose dependent rect. 5 16
717 19.67 precipitation 0.1 10 < th dose independent rect. 5 16
724 19.67 precipitation 0.1 10 < th dose dependent rect. 5 16
744 19.69 radiation 1.0 270 < th dose dependent sin 1 NA
764 19.72 atmosphere 995.0 10 > th dose independent rect. 5 16
772 19.73 radiation 1.0 270 > th dose independent sin 1 NA
814 19.76 precipitation 0.1 10 < th dose independent rect. 21 8
819 19.76 precipitation 0.1 10 < th dose dependent rect. 21 8
845 19.78 humidity 70.0 10 > th dose independent rect. 4 8
866 19.78 humidity 50.0 10 > th dose dependent rect. 21 7
906 19.81 atmosphere 1015.0 270 < th dose independent rect. 15 16
917 19.82 wind 5.0 270 < th dose independent rect. 3 3
932 19.82 wind 9.0 10 < th dose independent rect. 5 16