Os05g0410100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0410100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.24 | 0.841 | 7.86 | 0.866 | 4.51 | -1.84 | 2.07 | 2.67 | -0.756 | 8.1 | 20.08 | 1647 | -- | -- |
| 327.9 | 0.843 | 7.92 | 0.456 | 4.54 | -2.64 | 2.15 | -- | -0.813 | 8.08 | 19.5 | 1656 | -- | -- |
| 332.54 | 0.849 | 7.88 | 0.933 | 4.5 | -1.96 | -- | 2.7 | -0.765 | 8.09 | 19.9 | 1635 | -- | -- |
| 339.79 | 0.859 | 7.94 | 0.571 | 4.5 | -2.68 | -- | -- | -0.857 | 8.08 | 19.33 | 1631 | -- | -- |
| 1363.72 | 1.72 | 8 | 0.993 | -- | -1.98 | -- | 2.37 | -0.646 | -- | 21.29 | 511 | -- | -- |
| 427.66 | 0.969 | 8.04 | -0.487 | 4.49 | -- | 2.4 | -- | -1.31 | 8.1 | -- | -- | -- | -- |
| 445.01 | 0.988 | 8.04 | -0.42 | 4.49 | -- | -- | -- | -1.31 | 8.08 | -- | -- | -- | -- |
| 1081.06 | 1.53 | 7.95 | 0.454 | -- | -3.02 | -- | -- | -0.341 | -- | 25.8 | 581 | -- | -- |
| 346.34 | 0.867 | 7.96 | -- | 4.51 | -2.48 | -- | -- | -0.969 | 8.08 | 19.13 | 1627 | -- | -- |
| 1551.71 | 1.84 | 8.15 | -0.379 | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
| 449.65 | 0.992 | 8.03 | -- | 4.49 | -- | -- | -- | -1.26 | 8.09 | -- | -- | -- | -- |
| 1087.17 | 1.54 | 7.96 | -- | -- | -2.95 | -- | -- | -0.434 | -- | 25.8 | 581 | -- | -- |
| 1555.5 | 1.84 | 8.14 | -- | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 319.13 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 3 | 319.54 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 5 | 319.88 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 23 |
| 9 | 321.09 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 13 | 321.18 | wind | 9 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 21 | 321.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 44 | 322.24 | wind | 9 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 65 | 322.86 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 67 | 322.93 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 76 | 323.18 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 82 | 323.24 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 87 | 323.31 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 88 | 323.32 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 99 | 323.50 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 101 | 323.52 | wind | 9 | 43200 | > th | dose independent | sin | 3 | NA |
| 105 | 323.64 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 106 | 323.65 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 111 | 323.70 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 114 | 323.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 118 | 323.81 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 126 | 323.97 | wind | 9 | 43200 | < th | dose independent | sin | 3 | NA |
| 151 | 324.20 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 159 | 324.30 | wind | 3 | 43200 | > th | dose independent | sin | 4 | NA |
| 177 | 324.49 | wind | 3 | 43200 | < th | dose independent | sin | 4 | NA |
| 184 | 324.54 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 191 | 324.62 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 192 | 324.64 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 200 | 324.70 | wind | 5 | 43200 | < th | dose dependent | rect. | 21 | 17 |
| 220 | 324.98 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 238 | 325.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 250 | 325.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 18 |
| 253 | 325.18 | temperature | 20 | 90 | > th | dose independent | sin | 15 | NA |
| 262 | 325.22 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 265 | 325.26 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 291 | 325.40 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 16 |
| 298 | 325.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 18 |
| 301 | 325.51 | wind | 5 | 43200 | < th | dose dependent | sin | 10 | NA |
| 318 | 325.60 | wind | 5 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 322 | 325.62 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 17 |
| 369 | 325.88 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 381 | 325.93 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 400 | 326.01 | wind | 3 | 43200 | > th | dose independent | sin | 10 | NA |
| 413 | 326.05 | wind | 1 | 43200 | > th | dose dependent | rect. | 21 | 10 |
| 420 | 326.07 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 428 | 326.11 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 443 | 326.23 | temperature | 20 | 90 | < th | dose independent | sin | 14 | NA |
| 452 | 326.28 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 458 | 326.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 465 | 326.33 | wind | 5 | 43200 | < th | dose dependent | sin | 5 | NA |
| 470 | 326.34 | wind | 3 | 43200 | < th | dose independent | sin | 10 | NA |
| 476 | 326.35 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 14 |
| 479 | 326.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 480 | 326.36 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 14 |
| 483 | 326.37 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 487 | 326.37 | wind | 1 | 43200 | > th | dose dependent | sin | 10 | NA |
| 511 | 326.41 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 541 | 326.57 | wind | 1 | 43200 | > th | dose dependent | sin | 5 | NA |
| 544 | 326.58 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 14 |
| 546 | 326.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 548 | 326.59 | wind | 7 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 551 | 326.60 | wind | 9 | 43200 | < th | dose dependent | sin | 5 | NA |
| 557 | 326.62 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 580 | 326.66 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 584 | 326.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 595 | 326.73 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 635 | 326.86 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 674 | 326.94 | wind | 7 | 43200 | > th | dose dependent | rect. | 23 | 17 |
| 679 | 326.95 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 14 |
| 686 | 326.97 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 19 |
| 701 | 327.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 702 | 327.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 717 | 327.05 | temperature | 20 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 730 | 327.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 14 | 14 |
| 767 | 327.14 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 770 | 327.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 834 | 327.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 845 | 327.31 | temperature | 25 | 90 | < th | dose dependent | sin | 14 | NA |
| 906 | 327.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 922 | 327.47 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 976 | 327.59 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 983 | 327.59 | wind | 7 | 43200 | > th | dose dependent | sin | 3 | NA |
| 993 | 327.62 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 8 |