Os05g0396700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0396700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.09 | 0.564 | 6.79 | -2.31 | 0.9 | 2.97 | 0.208 | -2.15 | 0.134 | 2.99 | 20.1 | 1516 | -- | -- |
| 149.11 | 0.569 | 6.77 | -1.71 | 0.884 | 2.99 | 0.195 | -- | 0.258 | 2.87 | 19.62 | 1532 | -- | -- |
| 144.2 | 0.559 | 6.79 | -2.32 | 0.919 | 2.97 | -- | -2.21 | 0.13 | 3.06 | 20.23 | 1533 | -- | -- |
| 148.09 | 0.567 | 6.71 | -1.7 | 0.91 | 2.96 | -- | -- | 0.302 | 3 | 19.43 | 1529 | -- | -- |
| 175.68 | 0.617 | 6.78 | -2.3 | -- | 3.21 | -- | -1.63 | 0.157 | -- | 19.88 | 2558 | -- | -- |
| 404.75 | 0.943 | 6.56 | -0.581 | 1 | -- | 0.336 | -- | 0.998 | 2.84 | -- | -- | -- | -- |
| 405.13 | 0.943 | 6.56 | -0.589 | 1.01 | -- | -- | -- | 0.996 | 2.87 | -- | -- | -- | -- |
| 177.89 | 0.621 | 6.72 | -1.85 | -- | 3.19 | -- | -- | 0.283 | -- | 19.16 | 2558 | -- | -- |
| 212.24 | 0.679 | 6.64 | -- | 0.752 | 2.37 | -- | -- | 0.575 | 2.98 | 20.6 | 1401 | -- | -- |
| 463.59 | 1.01 | 6.55 | -0.546 | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
| 414.26 | 0.952 | 6.54 | -- | 0.995 | -- | -- | -- | 1.06 | 2.87 | -- | -- | -- | -- |
| 233.58 | 0.712 | 6.65 | -- | -- | 2.64 | -- | -- | 0.592 | -- | 20.7 | 1194 | -- | -- |
| 471.45 | 1.01 | 6.54 | -- | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 12 | 139.00 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 80 | 142.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 115 | 144.34 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 131 | 144.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 134 | 144.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 224 | 147.42 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 349 | 148.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 354 | 149.02 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 384 | 149.19 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 446 | 149.58 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 503 | 149.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 537 | 150.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 578 | 150.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 591 | 150.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 620 | 150.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 631 | 150.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 699 | 150.91 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 792 | 151.47 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 4 |