Os05g0392200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Generic methyltransferase domain containing protein.
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Os05g0392200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Generic methyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.77 | 0.239 | 9.37 | -1.53 | 0.514 | -0.613 | 0.221 | 0.311 | -0.457 | 23.9 | 27.33 | 181 | -- | -- |
| 25.89 | 0.237 | 9.36 | -1.48 | 0.514 | -0.63 | 0.287 | -- | -0.445 | 23.9 | 27.15 | 176 | -- | -- |
| 25.95 | 0.237 | 9.37 | -1.55 | 0.509 | -0.594 | -- | 0.429 | -0.459 | 23.8 | 27.4 | 180 | -- | -- |
| 26.23 | 0.239 | 9.36 | -1.48 | 0.512 | -0.622 | -- | -- | -0.444 | 23.9 | 27.1 | 178 | -- | -- |
| 33.83 | 0.271 | 9.36 | -1.58 | -- | -0.77 | -- | 0.263 | -0.467 | -- | 30.47 | 817 | -- | -- |
| 31.51 | 0.263 | 9.33 | -1.31 | 0.441 | -- | 0.213 | -- | -0.308 | 22.8 | -- | -- | -- | -- |
| 31.7 | 0.264 | 9.33 | -1.32 | 0.441 | -- | -- | -- | -0.309 | 22.7 | -- | -- | -- | -- |
| 33.9 | 0.271 | 9.35 | -1.53 | -- | -0.765 | -- | -- | -0.455 | -- | 30.23 | 820 | -- | -- |
| 77.23 | 0.412 | 9.3 | -- | 0.429 | 0.372 | -- | -- | -0.155 | 22.5 | 18.12 | 42 | -- | -- |
| 43.7 | 0.309 | 9.32 | -1.31 | -- | -- | -- | -- | -0.306 | -- | -- | -- | -- | -- |
| 77.79 | 0.413 | 9.3 | -- | 0.432 | -- | -- | -- | -0.161 | 22.5 | -- | -- | -- | -- |
| 87.47 | 0.436 | 9.28 | -- | -- | 0.336 | -- | -- | -0.121 | -- | 34.4 | 11 | -- | -- |
| 89.23 | 0.441 | 9.29 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 2 | 25.39 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 4 | 25.45 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 6 | 25.47 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 17 | 25.68 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 21 | 25.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 34 | 25.78 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 82 | 26.01 | temperature | 30.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 100 | 26.08 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 113 | 26.11 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 117 | 26.12 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 121 | 26.15 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 131 | 26.17 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 132 | 26.17 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 133 | 26.17 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 151 | 26.20 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 163 | 26.22 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 166 | 26.23 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 185 | 26.26 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 186 | 26.26 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 223 | 26.33 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 233 | 26.34 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 254 | 26.37 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 256 | 26.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 278 | 26.41 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 306 | 26.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 317 | 26.47 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 318 | 26.47 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 430 | 26.59 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 437 | 26.60 | wind | 9.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 449 | 26.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 460 | 26.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 467 | 26.63 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 487 | 26.64 | wind | 9.0 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 491 | 26.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 565 | 26.72 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 603 | 26.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 643 | 26.78 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 667 | 26.80 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 670 | 26.81 | humidity | 90.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 711 | 26.83 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 763 | 26.87 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 786 | 26.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 790 | 26.89 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 794 | 26.89 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 18 | 11 |
| 799 | 26.89 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 825 | 26.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 895 | 26.96 | temperature | 15.0 | 270 | > th | dose dependent | no | NA | NA |
| 916 | 26.97 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 917 | 26.98 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 919 | 26.98 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 956 | 27.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 957 | 27.00 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 960 | 27.00 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |