Os05g0391200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0391200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.59 | 0.383 | 10.1 | -0.172 | 0.644 | 0.656 | 1.28 | -0.624 | -0.0806 | 4.46 | 50 | 1278 | -- | -- |
| 67.08 | 0.381 | 10.1 | -0.129 | 0.636 | 0.639 | 1.27 | -- | -0.0747 | 4.47 | 50 | 1276 | -- | -- |
| 70.98 | 0.392 | 10.1 | -0.175 | 0.653 | 0.673 | -- | -0.559 | -0.084 | 4.55 | 50 | 1276 | -- | -- |
| 71.37 | 0.393 | 10.1 | -0.137 | 0.651 | 0.657 | -- | -- | -0.0801 | 4.61 | 50 | 1251 | -- | -- |
| 93.54 | 0.45 | 10.2 | -0.133 | -- | 0.71 | -- | -0.383 | -0.0757 | -- | 50 | 1305 | -- | -- |
| 77.24 | 0.412 | 10.1 | -0.13 | 0.677 | -- | 1.31 | -- | -0.0632 | 4.18 | -- | -- | -- | -- |
| 82.03 | 0.424 | 10.1 | -0.143 | 0.685 | -- | -- | -- | -0.0703 | 4.2 | -- | -- | -- | -- |
| 93.72 | 0.451 | 10.2 | -0.108 | -- | 0.736 | -- | -- | -0.0728 | -- | 49.37 | 1279 | -- | -- |
| 71.87 | 0.395 | 10.1 | -- | 0.65 | 0.659 | -- | -- | -0.0665 | 4.61 | 50 | 1252 | -- | -- |
| 107.41 | 0.484 | 10.2 | -0.116 | -- | -- | -- | -- | -0.0521 | -- | -- | -- | -- | -- |
| 82.57 | 0.425 | 10.1 | -- | 0.682 | -- | -- | -- | -0.0544 | 4.21 | -- | -- | -- | -- |
| 94.02 | 0.452 | 10.2 | -- | -- | 0.739 | -- | -- | -0.0636 | -- | 49.03 | 1279 | -- | -- |
| 107.77 | 0.485 | 10.1 | -- | -- | -- | -- | -- | -0.0393 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.22 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 2 | 61.24 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 3 | 62.18 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 19 | 63.39 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 21 | 63.50 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 22 | 63.50 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 38 | 64.16 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 13 |
| 39 | 64.19 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 52 | 64.36 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 66 | 64.51 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 68 | 64.68 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 69 | 64.69 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 81 | 64.76 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 95 | 64.94 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 97 | 65.07 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 99 | 65.21 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 113 | 65.21 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 114 | 65.30 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 116 | 65.57 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 147 | 65.78 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 153 | 65.87 | wind | 3.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 186 | 66.54 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 206 | 66.61 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 207 | 66.62 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 6 |
| 209 | 66.64 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 212 | 66.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 214 | 66.67 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 222 | 66.77 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 237 | 66.80 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 253 | 66.82 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 268 | 66.85 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 276 | 66.91 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 278 | 66.91 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 282 | 66.93 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 298 | 66.96 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 316 | 66.98 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 318 | 67.00 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 342 | 67.07 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 344 | 67.08 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 346 | 67.09 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 353 | 67.11 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 359 | 67.12 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 366 | 67.14 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 367 | 67.14 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 388 | 67.23 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 389 | 67.24 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 392 | 67.25 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 398 | 67.27 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 401 | 67.27 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 403 | 67.28 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 418 | 67.28 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 438 | 67.37 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 439 | 67.38 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 466 | 67.48 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 468 | 67.49 | humidity | 60.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 470 | 67.49 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 475 | 67.50 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 478 | 67.51 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 11 |
| 481 | 67.52 | wind | 3.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 483 | 67.52 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 507 | 67.54 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 513 | 67.54 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 521 | 67.55 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 533 | 67.57 | wind | 3.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 540 | 67.58 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 17 |
| 550 | 67.62 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 561 | 67.67 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 577 | 67.68 | humidity | 60.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 578 | 67.68 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 579 | 67.69 | wind | 7.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 581 | 67.69 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 584 | 67.69 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 588 | 67.69 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 601 | 67.70 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 607 | 67.70 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 663 | 67.80 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 668 | 67.80 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 713 | 67.82 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 717 | 67.83 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 729 | 67.84 | wind | 1.0 | 30 | > th | dose independent | sin | 4 | NA |
| 736 | 67.85 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 742 | 67.87 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 758 | 67.90 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 795 | 68.00 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 828 | 68.03 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 19 |