BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0391200 Os05g0391200|AK059645
         (442 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41770.1  | chr2:17424549-17427042 REVERSE LENGTH=772          594   e-170
AT3G57420.1  | chr3:21252605-21255115 REVERSE LENGTH=766          592   e-169

>AT2G41770.1 | chr2:17424549-17427042 REVERSE LENGTH=772
          Length = 771

 Score =  594 bits (1531), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 278/444 (62%), Positives = 341/444 (76%), Gaps = 4/444 (0%)

Query: 1   MAPVNSFNTLFHTPAFWGLMMPVSVSSMASDVIRGYWAQRILWEIGGYVAFYPPTIYRKD 60
           M PVNSFNTL+H+ AFWGLM+PVSVSSMASDV+RGYW QR+LWE+GGYVA YPPT +R D
Sbjct: 330 MVPVNSFNTLYHSSAFWGLMLPVSVSSMASDVLRGYWGQRLLWELGGYVAVYPPTAHRFD 389

Query: 61  HIQAYPFAEEKDLHVNVGRLIKFLNEWRSNKRTLFERILDLSYAMAEEGFWTEQDVRLTA 120
            I+AYPF EEKDLHVNVGRLIKFL  WRS K + FE +LDLS+AMAEEGFWTEQD++ TA
Sbjct: 390 RIEAYPFVEEKDLHVNVGRLIKFLLAWRSEKHSFFETVLDLSFAMAEEGFWTEQDLKFTA 449

Query: 121 AWLQDLLAVGYRQPRLMSLEIDRQRATIGEGDMKEFVPKKLPSVHLGVDEIGTVNYEIGN 180
           AWLQDL+AVGY+QPRLMSLE+DR RA+IG GD KEFVP+KLPSVHLGV+E GTV+ EIGN
Sbjct: 450 AWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSTEIGN 509

Query: 181 LIKWRKNFGNVVLIMHVSGPVDRTALEWRLLYGRIFKTVIILAEQSNTELAVERCALSHA 240
           LI+WRKNFGNVVL+M  +GPV+RTALEWRLLYGRIFKTV+IL+ Q N++L VE   L H 
Sbjct: 510 LIRWRKNFGNVVLVMFCNGPVERTALEWRLLYGRIFKTVVILSSQKNSDLYVEEAKLDHI 569

Query: 241 YKFLPKVFARYGGADGFLFLQDHMILNYWNLLQADKEKLWITNKIAHSWVTVPLENNKEE 300
           YK LPK+F RY  A+GFLF++D  +LNYWNLLQADK K+W T+K++ SW +V    N  +
Sbjct: 570 YKHLPKIFDRYSSAEGFLFVEDDTVLNYWNLLQADKSKIWTTDKVSKSWTSVKPTGN-SD 628

Query: 301 WFVKQGSMVKQVIGSSPVHFQTNYKESM--GEDKIAFCGSELFYIPRQFXXXXXXXXXXX 358
           WF  Q  +VK+ + + P HFQ NYK++     + +  C SE+FY+P++            
Sbjct: 629 WFSVQAELVKKTVSTMPAHFQVNYKDATKNNHETLTVCSSEVFYVPKRLVTDFIDLVDLV 688

Query: 359 XXXXXHHKVAVPMFFLAMDSPKNFDSDALAGTVFRSNLVGNETFSSIYTAHAPAVFPVKV 418
                H+KVAVPMFFL+MDSP+NFD   L   V++       T SS+Y+A APAV P  +
Sbjct: 689 GDMDLHYKVAVPMFFLSMDSPQNFDP-VLGSMVYKRKSASFNTSSSLYSAKAPAVHPWSI 747

Query: 419 QNEIDFIKLIRVMSTGDPLLMELV 442
            +E DFIKL++ M+ GDPLLMELV
Sbjct: 748 SSEQDFIKLVQQMAEGDPLLMELV 771



>AT3G57420.1 | chr3:21252605-21255115 REVERSE LENGTH=766
          Length = 765

 Score =  592 bits (1525), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 283/445 (63%), Positives = 342/445 (76%), Gaps = 5/445 (1%)

Query: 1   MAPVNSFNTLFHTPAFWGLMMPVSVSSMASDVIRGYWAQRILWEIGGYVAFYPPTIYRKD 60
           M PVNSFNTL+H+ AFWGLM+PVSVSSMASDVIRGYW QR+LWE+GGYVA YPPT++R D
Sbjct: 323 MVPVNSFNTLYHSSAFWGLMLPVSVSSMASDVIRGYWGQRLLWELGGYVAVYPPTVHRYD 382

Query: 61  HIQAYPFAEEKDLHVNVGRLIKFLNEWRSNKRTLFERILDLSYAMAEEGFWTEQDVRLTA 120
            ++AYPF++EKDLH+NVGRLIKFL  WRSNK   FE ILDLS+ MAE+GFWTE DV+ TA
Sbjct: 383 RVEAYPFSDEKDLHINVGRLIKFLLAWRSNKHRFFETILDLSFVMAEQGFWTELDVKFTA 442

Query: 121 AWLQDLLAVGYRQPRLMSLEIDRQRATIGEGDMKEFVPKKLPSVHLGVDEIGTVNYEIGN 180
           AWLQDLL VGY+QPRLMSLE+DR RATIG GD KEFVP+KLPSVHLGV+EIGTV+ EIGN
Sbjct: 443 AWLQDLLMVGYQQPRLMSLELDRPRATIGHGDRKEFVPRKLPSVHLGVEEIGTVSSEIGN 502

Query: 181 LIKWRKNFGNVVLIMHVSGPVDRTALEWRLLYGRIFKTVIILAEQSNTELAVERCALSHA 240
           LIKWRKNFGNVVLIM  +GPV+RTALEWRLLYGRIFKTV+IL+ + N++L V+   L H 
Sbjct: 503 LIKWRKNFGNVVLIMFCNGPVERTALEWRLLYGRIFKTVVILSSRKNSDLYVQEAKLDHI 562

Query: 241 YKFLPKVFARYGGADGFLFLQDHMILNYWNLLQADKEKLWITNKIAHSWVTVPLENNKEE 300
           YK LPK+F RY  ADGF+F++D  +LNYWNLLQADK KLW T+K+  SW TV    N  +
Sbjct: 563 YKRLPKIFDRYSSADGFVFVEDDTVLNYWNLLQADKTKLWTTDKVTESWTTVRPAGNS-D 621

Query: 301 WFVKQGSMVKQVIGSSPVHFQTNYKESMGED---KIAFCGSELFYIPRQFXXXXXXXXXX 357
           W+  Q  +VK+++ + PVHFQ NYKE+        +  C SE+FY+P++F          
Sbjct: 622 WYSVQAELVKKIVSTMPVHFQVNYKEATKNSDGTSLTMCSSEVFYVPKRFVSDFTDLVNL 681

Query: 358 XXXXXXHHKVAVPMFFLAMDSPKNFDSDALAGTVFRSNLVGNETFSSIYTAHAPAVFPVK 417
                 H+KVAVPMFFL+MDSP+NFD   L   V++S      +  S+Y+A APAV P  
Sbjct: 682 VGDMDLHYKVAVPMFFLSMDSPQNFDP-VLGSMVYKSEPASLNSSLSLYSAEAPAVHPWS 740

Query: 418 VQNEIDFIKLIRVMSTGDPLLMELV 442
           + NE DFIKL+R M+ GDPLLMELV
Sbjct: 741 ISNEQDFIKLVREMAEGDPLLMELV 765



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.138    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,565,336
Number of extensions: 397727
Number of successful extensions: 772
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 764
Number of HSP's successfully gapped: 2
Length of query: 442
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 340
Effective length of database: 8,310,137
Effective search space: 2825446580
Effective search space used: 2825446580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)