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Os05g0390800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : VQ domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0278) R2 : 0.581
β1 : -1.55 (0.102) R2dD : 0.222 R2D : 0.228
β2 : 1.34 (0.0719) R2dC : 0.321 R2C : 0.312
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.254 (0.0592) R2dN8 : 0.0227 R2N8 : 0.0423
σ : 0.522
deviance : 124.19
__
_____
C
peak time of C : 7.11
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.67 0.478 12.3 -2.2 1.36 -0.191 1.66 2.34 0.0794 7.17 0.53 4225 -- --
111.65 0.496 12.3 -1.58 1.52 0.314 1.84 -- 0.261 7.97 0.53 4225 -- --
105.63 0.479 12.3 -2.2 1.54 -0.543 -- 2.86 0.0944 7.19 0.6 3823 -- --
119.64 0.509 12.3 -1.79 1.45 -0.411 -- -- 0.128 7.33 0.006669 14278 -- --
151.93 0.574 12.2 -1.72 -- 1.67 -- 3.78 0.36 -- 0.7603 3730 -- --
114.58 0.502 12.3 -1.59 1.33 -- 1.9 -- 0.259 7.2 -- -- -- --
124.19 0.522 12.3 -1.55 1.34 -- -- -- 0.254 7.11 -- -- -- --
170.84 0.609 12.3 -1.38 -- 1.56 -- -- 0.507 -- 1.86 3693 -- --
160.82 0.591 12.3 -- 1.33 -1.02 -- -- 0.54 7.14 39.96 47520 -- --
218.79 0.691 12.3 -1.53 -- -- -- -- 0.278 -- -- -- -- --
187.6 0.641 12.2 -- 1.32 -- -- -- 0.427 7.18 -- -- -- --
216.81 0.686 12.2 -- -- 1.78 -- -- 0.612 -- 0.68 3731 -- --
280.17 0.781 12.3 -- -- -- -- -- 0.447 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.18 temperature 20.0 270 > th dose dependent rect. 16 6
3 99.40 wind 7.0 270 < th dose independent rect. 13 10
10 100.02 temperature 20.0 30 > th dose dependent rect. 17 10
14 100.29 temperature 15.0 270 > th dose independent rect. 7 22
15 100.33 wind 9.0 14400 > th dose independent rect. 16 18
16 100.35 wind 9.0 14400 > th dose independent rect. 16 16
18 100.36 temperature 30.0 90 < th dose independent rect. 11 18
19 100.41 wind 9.0 14400 < th dose independent rect. 16 18
20 100.42 temperature 20.0 270 > th dose independent rect. 14 8
23 100.43 radiation 20.0 14400 < th dose independent rect. 24 6
26 100.48 atmosphere 1005.0 90 > th dose independent rect. 23 6
28 100.48 humidity 60.0 270 > th dose dependent rect. 5 2
37 100.61 temperature 10.0 1440 > th dose independent rect. 6 6
40 100.61 atmosphere 995.0 1440 > th dose independent rect. 6 6
41 100.61 temperature 10.0 1440 > th dose independent rect. 12 18
46 100.63 atmosphere 995.0 270 > th dose independent rect. 7 22
47 100.64 temperature 10.0 90 > th dose dependent rect. 5 18
50 100.68 temperature 15.0 90 > th dose independent rect. 11 18
56 100.75 humidity 80.0 270 > th dose independent rect. 5 2
60 100.77 wind 7.0 270 < th dose independent rect. 12 23
61 100.78 wind 9.0 14400 > th dose independent rect. 17 2
62 100.80 wind 9.0 14400 < th dose independent rect. 17 2
70 100.94 precipitation 0.1 90 < th dose independent rect. 11 18
71 100.94 precipitation 0.1 90 < th dose dependent rect. 11 18
74 100.98 wind 9.0 14400 > th dose independent sin 11 NA
79 101.04 precipitation 0.1 270 < th dose independent rect. 7 22
80 101.04 precipitation 0.1 270 < th dose dependent rect. 7 22
81 101.06 radiation 20.0 270 < th dose independent rect. 5 2
82 101.09 wind 9.0 14400 < th dose independent sin 11 NA
86 101.15 wind 9.0 270 < th dose dependent rect. 5 2
87 101.16 temperature 10.0 90 > th dose independent rect. 5 6
89 101.16 atmosphere 995.0 90 > th dose independent rect. 5 6
90 101.16 atmosphere 1015.0 90 < th dose independent rect. 5 6
92 101.16 temperature 10.0 270 > th dose dependent rect. 5 2
93 101.17 precipitation 0.1 90 < th dose independent rect. 5 6
94 101.17 precipitation 0.1 90 < th dose dependent rect. 5 6
95 101.18 wind 7.0 270 < th dose independent rect. 5 2
97 101.18 temperature 10.0 270 > th dose independent rect. 5 2
99 101.18 temperature 30.0 270 < th dose independent rect. 5 2
100 101.18 humidity 50.0 270 > th dose independent rect. 5 2
102 101.18 atmosphere 995.0 270 > th dose independent rect. 5 2
103 101.18 atmosphere 1015.0 270 < th dose independent rect. 5 2
106 101.18 wind 1.0 30 > th dose independent rect. 5 6
108 101.19 precipitation 0.1 270 < th dose independent rect. 5 2
109 101.19 precipitation 0.1 270 < th dose dependent rect. 5 2
110 101.21 wind 9.0 90 < th dose independent rect. 5 6
111 101.21 radiation 20.0 14400 < th dose independent rect. 21 9
118 101.27 temperature 15.0 10 > th dose independent rect. 11 19
123 101.29 wind 9.0 14400 > th dose dependent rect. 18 16
124 101.30 wind 3.0 270 < th dose independent rect. 5 2
128 101.32 wind 9.0 90 < th dose dependent rect. 5 6
129 101.32 wind 9.0 14400 > th dose dependent rect. 16 18
130 101.33 radiation 1.0 30 > th dose independent rect. 17 18
131 101.33 radiation 40.0 270 < th dose dependent rect. 5 2
137 101.35 wind 9.0 14400 > th dose independent rect. 16 5
140 101.36 wind 9.0 14400 > th dose dependent sin 11 NA
159 101.40 wind 9.0 14400 < th dose independent rect. 16 7
185 101.49 radiation 1.0 4320 < th dose dependent rect. 12 5
205 101.54 temperature 10.0 90 > th dose dependent rect. 5 6
210 101.55 precipitation 0.1 10 < th dose independent rect. 11 19
213 101.55 precipitation 0.1 10 < th dose dependent rect. 11 19
221 101.59 humidity 50.0 90 > th dose independent rect. 5 6
230 101.62 wind 9.0 90 < th dose independent rect. 11 18
246 101.67 precipitation 0.1 14400 < th dose independent rect. 8 1
254 101.67 precipitation 0.1 14400 < th dose dependent rect. 8 1
271 101.71 wind 7.0 270 < th dose independent rect. 4 14
295 101.81 wind 7.0 14400 > th dose dependent rect. 17 4
299 101.83 humidity 50.0 90 > th dose dependent rect. 5 5
300 101.84 radiation 1.0 4320 > th dose independent rect. 12 5
302 101.84 wind 7.0 14400 > th dose dependent rect. 17 2
307 101.86 atmosphere 995.0 90 > th dose independent rect. 11 18
313 101.88 wind 7.0 14400 > th dose independent rect. 20 11
315 101.88 atmosphere 995.0 270 > th dose independent rect. 9 18
327 101.91 temperature 30.0 270 < th dose independent rect. 8 21
331 101.92 radiation 1.0 4320 < th dose independent rect. 12 5
339 101.94 humidity 50.0 14400 > th dose independent rect. 19 11
358 102.01 radiation 1.0 4320 < th dose independent rect. 13 2
360 102.01 wind 7.0 14400 < th dose independent rect. 20 12
363 102.01 radiation 1.0 4320 < th dose dependent rect. 13 2
388 102.05 precipitation 0.1 10 < th dose independent rect. 6 5
392 102.05 precipitation 0.1 10 < th dose dependent rect. 6 5
397 102.06 temperature 10.0 10 > th dose independent rect. 6 5
399 102.06 humidity 50.0 10 > th dose independent rect. 6 5
400 102.06 atmosphere 995.0 10 > th dose independent rect. 6 5
401 102.06 atmosphere 1015.0 10 < th dose independent rect. 6 5
409 102.07 radiation 1.0 4320 > th dose independent rect. 13 1
411 102.07 wind 9.0 10 < th dose independent rect. 6 5
433 102.09 radiation 1.0 4320 < th dose dependent rect. 16 1
436 102.09 atmosphere 995.0 10 > th dose dependent rect. 11 19
499 102.21 temperature 15.0 1440 > th dose independent rect. 12 5
534 102.26 wind 9.0 10 < th dose dependent rect. 6 5
538 102.27 radiation 1.0 10 > th dose independent rect. 6 5
544 102.28 temperature 10.0 43200 > th dose independent rect. 10 7
610 102.35 wind 7.0 14400 > th dose independent rect. 14 8
631 102.37 radiation 1.0 4320 > th dose independent rect. 9 8
645 102.38 humidity 50.0 10 > th dose dependent rect. 6 5
659 102.40 wind 7.0 14400 > th dose independent rect. 14 11
664 102.40 temperature 25.0 270 > th dose dependent rect. 17 15
665 102.41 radiation 1.0 4320 < th dose independent rect. 9 8
678 102.42 atmosphere 995.0 10 > th dose independent rect. 11 19
686 102.43 temperature 10.0 90 > th dose dependent rect. 23 6
690 102.44 wind 7.0 14400 < th dose independent rect. 14 8
738 102.53 atmosphere 1005.0 10 > th dose independent rect. 23 7
740 102.53 wind 7.0 14400 < th dose independent rect. 14 11
758 102.55 wind 9.0 270 < th dose independent rect. 7 22
767 102.57 wind 7.0 14400 < th dose independent rect. 6 1
775 102.58 precipitation 0.1 14400 > th dose independent rect. 8 1
777 102.58 precipitation 0.1 14400 > th dose dependent rect. 8 1
786 102.60 wind 7.0 270 < th dose independent rect. 4 16
793 102.61 wind 7.0 14400 > th dose independent rect. 6 1
801 102.62 wind 9.0 10 < th dose independent rect. 11 19
869 102.72 humidity 50.0 270 > th dose independent rect. 8 21
911 102.77 wind 7.0 90 < th dose independent rect. 5 18
949 102.82 wind 7.0 30 < th dose independent rect. 16 19
964 102.84 radiation 40.0 270 < th dose independent rect. 3 6
977 102.85 radiation 20.0 4320 < th dose independent rect. 17 8