Os05g0390500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NLI interacting factor domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0390500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : NLI interacting factor domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.76 | 0.18 | 11.5 | 0.535 | 0.375 | 0.363 | 0.0397 | 0.698 | 0.239 | 16.7 | 21.21 | 1329 | -- | -- |
| 15.69 | 0.184 | 11.5 | 0.398 | 0.379 | 0.276 | 0.033 | -- | 0.19 | 16.4 | 21.88 | 1140 | -- | -- |
| 14.76 | 0.179 | 11.5 | 0.541 | 0.376 | 0.353 | -- | 0.682 | 0.239 | 16.7 | 21.36 | 1320 | -- | -- |
| 15.67 | 0.184 | 11.5 | 0.38 | 0.38 | 0.281 | -- | -- | 0.199 | 16.5 | 21.7 | 1143 | -- | -- |
| 21.96 | 0.218 | 11.5 | 0.516 | -- | 0.335 | -- | 0.629 | 0.229 | -- | 21.41 | 1843 | -- | -- |
| 18.35 | 0.201 | 11.5 | 0.493 | 0.364 | -- | 0.0334 | -- | 0.285 | 16.8 | -- | -- | -- | -- |
| 18.35 | 0.201 | 11.5 | 0.494 | 0.364 | -- | -- | -- | 0.286 | 16.8 | -- | -- | -- | -- |
| 22.82 | 0.222 | 11.5 | 0.348 | -- | 0.291 | -- | -- | 0.188 | -- | 21.51 | 1908 | -- | -- |
| 18.47 | 0.2 | 11.5 | -- | 0.372 | 0.407 | -- | -- | 0.114 | 16.7 | 21.1 | 7083 | -- | -- |
| 25.36 | 0.235 | 11.5 | 0.48 | -- | -- | -- | -- | 0.276 | -- | -- | -- | -- | -- |
| 24.77 | 0.233 | 11.5 | -- | 0.355 | -- | -- | -- | 0.231 | 16.8 | -- | -- | -- | -- |
| 25.13 | 0.233 | 11.5 | -- | -- | 0.398 | -- | -- | 0.119 | -- | 18.7 | 46458 | -- | -- |
| 31.43 | 0.262 | 11.5 | -- | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.16 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 14.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 14.24 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 14.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 14.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 6 | 14.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 7 | 14.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 9 | 14.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 10 | 14.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 11 | 14.72 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 15 | 14.77 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 19 | 14.84 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 20 | 14.85 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 30 | 14.95 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 31 | 14.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 33 | 14.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 49 | 15.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 50 | 15.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 53 | 15.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 59 | 15.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 60 | 15.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 66 | 15.09 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 15 |
| 71 | 15.10 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 72 | 15.11 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 83 | 15.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 93 | 15.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 94 | 15.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 99 | 15.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 101 | 15.16 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 107 | 15.17 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 113 | 15.18 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 116 | 15.19 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 123 | 15.20 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 129 | 15.21 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 130 | 15.21 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 147 | 15.23 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 148 | 15.23 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 161 | 15.24 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 173 | 15.26 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 176 | 15.26 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 183 | 15.27 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 186 | 15.27 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 187 | 15.27 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 192 | 15.27 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 210 | 15.28 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 231 | 15.30 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 258 | 15.31 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 6 | NA |
| 261 | 15.31 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 265 | 15.31 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 274 | 15.32 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 327 | 15.35 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 335 | 15.35 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 342 | 15.36 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 353 | 15.37 | temperature | 20.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 406 | 15.39 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 407 | 15.39 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 428 | 15.40 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 434 | 15.40 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 15 |
| 448 | 15.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 451 | 15.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 456 | 15.41 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 477 | 15.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 495 | 15.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 501 | 15.43 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 510 | 15.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 520 | 15.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 529 | 15.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 578 | 15.45 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 13 |
| 594 | 15.46 | temperature | 20.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 609 | 15.46 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 618 | 15.46 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 646 | 15.47 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 661 | 15.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 682 | 15.48 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 692 | 15.48 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 734 | 15.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 748 | 15.50 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 836 | 15.52 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 840 | 15.52 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 865 | 15.52 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 955 | 15.54 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 977 | 15.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 987 | 15.55 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 988 | 15.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |