Os05g0383100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Clathrin adaptor complex, medium chain family protein.
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Os05g0383100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Clathrin adaptor complex, medium chain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.55 | 0.392 | 8.38 | -1.14 | 1.1 | 1.18 | -0.36 | -2.11 | -0.266 | 6.15 | 25.31 | 125 | -- | -- |
| 70.92 | 0.392 | 8.36 | -0.91 | 1.11 | 1.01 | -0.14 | -- | -0.233 | 6.2 | 24.99 | 138 | -- | -- |
| 69.73 | 0.389 | 8.38 | -1.14 | 1.1 | 1.21 | -- | -2.11 | -0.254 | 6.23 | 25.7 | 135 | -- | -- |
| 70.92 | 0.392 | 8.36 | -0.904 | 1.1 | 1.01 | -- | -- | -0.218 | 6.23 | 25.01 | 139 | -- | -- |
| 112.8 | 0.497 | 8.39 | -0.975 | -- | 0.698 | -- | -2.33 | -0.174 | -- | 26.64 | 10 | -- | -- |
| 86.71 | 0.437 | 8.34 | -0.731 | 0.779 | -- | -0.308 | -- | -0.14 | 7.34 | -- | -- | -- | -- |
| 86.95 | 0.437 | 8.34 | -0.737 | 0.778 | -- | -- | -- | -0.139 | 7.4 | -- | -- | -- | -- |
| 114.16 | 0.5 | 8.36 | -0.785 | -- | 0.506 | -- | -- | -0.137 | -- | 26.39 | 7 | -- | -- |
| 91.15 | 0.445 | 8.34 | -- | 1.02 | 0.784 | -- | -- | -0.0853 | 6.52 | 25.8 | 148 | -- | -- |
| 119.19 | 0.51 | 8.36 | -0.725 | -- | -- | -- | -- | -0.127 | -- | -- | -- | -- | -- |
| 101.29 | 0.471 | 8.33 | -- | 0.771 | -- | -- | -- | -0.057 | 7.46 | -- | -- | -- | -- |
| 130.07 | 0.531 | 8.34 | -- | -- | 0.371 | -- | -- | -0.0549 | -- | 26.7 | 3 | -- | -- |
| 133.05 | 0.538 | 8.34 | -- | -- | -- | -- | -- | -0.0461 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 5 | 63.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 6 | 64.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 31 | 65.10 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 53 | 65.52 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 92 | 66.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 93 | 66.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 101 | 66.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 119 | 66.54 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 121 | 66.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 167 | 66.94 | temperature | 20 | 270 | > th | dose dependent | sin | 0 | NA |
| 276 | 67.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 11 |
| 315 | 67.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 379 | 68.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 381 | 68.39 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 492 | 68.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 649 | 69.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 694 | 69.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 715 | 69.66 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 6 |
| 749 | 69.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 779 | 69.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 785 | 69.80 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 816 | 69.89 | temperature | 25 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 870 | 69.99 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 889 | 70.00 | temperature | 25 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 934 | 70.09 | temperature | 15 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 954 | 70.11 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 23 |