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Os05g0382600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Annexin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.06) R2 : 0.673
β1 : -2.89 (0.303) R2dD : 0.151 R2D : 0.212
β2 : 1.99 (0.133) R2dC : 0.162 R2C : 0.117
β3 : -4.46 (0.241) R2dE : 0.383 R2E : 0.0471
β4 : 3.46 (0.516) R2dD*C : 0.0325 R2D*C : 0.00216
β5 : -6.26 (0.853) R2dD*E : 0.108 R2D*E : 0.0517
γ1 : 0.313 (0.135) R2dN8 : 0.00675 R2N8 : 0.037
σ : 1.04
deviance : 492.54
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C
peak time of C : 13.4
E
wheather : radiation
threshold : 1.25
memory length : 11476
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
492.54 1.04 11 -2.89 1.99 -4.46 3.46 -6.26 0.313 13.4 1.25 11476 -- --
533.85 1.08 11.1 -3.86 2.13 -3.01 3.81 -- 0.219 13.3 1.62 14343 -- --
514.07 1.06 11 -2.73 1.52 -4.25 -- -5.9 0.42 13.4 1.253 14633 -- --
545.54 1.09 11.2 -4.63 1.84 -3.77 -- -- -0.0356 13.7 1.22 14394 -- --
582.35 1.12 11.1 -3.14 -- -4.75 -- -5.26 0.0762 -- 1.318 14762 -- --
862.85 1.38 11 -3.26 1.74 -- 3.05 -- 1.01 13.4 -- -- -- --
899.79 1.4 11 -3.16 1.75 -- -- -- 1.03 13.7 -- -- -- --
617.83 1.16 11.2 -4.53 -- -4.43 -- -- -0.105 -- 1.4 14785 -- --
963.85 1.45 11.1 -- 1.81 -3.05 -- -- 0.328 13.6 3.493 10135 -- --
1085.91 1.54 11 -3.23 -- -- -- -- 0.994 -- -- -- -- --
1162.16 1.59 10.9 -- 1.81 -- -- -- 1.38 13.7 -- -- -- --
1050.68 1.51 11.1 -- -- -2.9 -- -- 0.736 -- 2.31 9049 -- --
1360.43 1.72 10.9 -- -- -- -- -- 1.35 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 428.29 humidity 90 43200 < th dose independent rect. 20 1
3 430.94 humidity 90 43200 > th dose independent rect. 20 1
6 432.58 humidity 90 43200 > th dose independent rect. 20 3
12 434.36 humidity 80 43200 > th dose independent rect. 12 6
17 435.35 humidity 90 43200 > th dose dependent rect. 20 1
20 435.68 humidity 90 43200 > th dose independent rect. 22 1
30 436.85 humidity 80 43200 < th dose independent rect. 12 5
32 437.18 humidity 90 43200 > th dose dependent rect. 19 4
49 439.15 humidity 80 43200 > th dose independent rect. 14 1
51 439.25 humidity 90 43200 < th dose independent rect. 14 9
77 440.88 humidity 80 43200 > th dose independent rect. 16 1
127 443.85 humidity 90 43200 < th dose independent rect. 9 14
145 444.86 humidity 80 43200 > th dose dependent rect. 17 2
149 445.09 humidity 90 43200 > th dose independent rect. 9 15
160 445.91 humidity 80 43200 > th dose dependent rect. 9 11
202 447.58 humidity 90 43200 > th dose independent rect. 4 20
203 447.61 humidity 90 43200 < th dose independent sin 19 NA
227 448.76 humidity 90 43200 < th dose independent rect. 3 20
243 449.27 humidity 90 43200 < th dose independent rect. 5 18
271 450.25 humidity 90 43200 > th dose independent sin 19 NA
300 450.75 humidity 80 43200 > th dose dependent sin 20 NA
321 451.32 humidity 80 43200 > th dose dependent rect. 9 6
322 451.36 humidity 70 43200 > th dose dependent rect. 13 1
375 452.82 humidity 90 43200 > th dose dependent rect. 5 19
386 453.19 humidity 80 43200 > th dose dependent rect. 10 1
406 453.87 humidity 70 43200 > th dose dependent rect. 12 3
410 453.96 humidity 90 43200 > th dose independent rect. 9 1
548 456.86 humidity 90 43200 > th dose independent rect. 15 23
559 457.06 humidity 90 43200 > th dose independent rect. 17 21
562 457.08 humidity 90 43200 > th dose independent rect. 17 23
570 457.26 humidity 90 43200 > th dose independent no NA NA
576 457.39 humidity 90 43200 > th dose independent rect. 11 23
583 457.48 humidity 90 43200 < th dose independent rect. 15 23
594 457.69 humidity 90 43200 > th dose independent rect. 19 23
602 457.86 humidity 90 43200 < th dose independent no NA NA
616 458.10 humidity 90 43200 < th dose independent rect. 17 23
629 458.29 humidity 90 43200 < th dose independent rect. 13 23
638 458.49 humidity 90 43200 > th dose independent rect. 8 23
646 458.54 humidity 90 43200 < th dose independent rect. 11 23
668 458.90 humidity 90 43200 < th dose independent rect. 8 3
686 459.22 humidity 90 43200 > th dose independent rect. 22 23
697 459.44 humidity 90 43200 > th dose independent rect. 4 6
707 459.64 humidity 90 43200 < th dose independent rect. 22 23
793 461.08 radiation 1 14400 < th dose dependent rect. 7 21
817 461.48 radiation 1 14400 < th dose dependent rect. 16 12
848 461.95 radiation 1 14400 < th dose dependent rect. 7 12
878 462.37 radiation 1 14400 < th dose independent rect. 7 12
883 462.41 radiation 1 14400 < th dose independent rect. 7 20
885 462.42 radiation 1 14400 < th dose independent rect. 7 17
899 462.52 radiation 1 14400 < th dose dependent rect. 16 3
918 462.69 humidity 90 43200 > th dose independent sin 3 NA
919 462.75 radiation 1 14400 < th dose dependent sin 18 NA