Os05g0373400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Paraneoplastic encephalomyelitis antigen family protein.
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Os05g0373400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Paraneoplastic encephalomyelitis antigen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.95 | 0.43 | 9.07 | -2.45 | 0.588 | 0.922 | -1.02 | -2 | -0.247 | 8.3 | 33.03 | 1243 | -- | -- |
| 84.14 | 0.427 | 9.03 | -2.16 | 0.598 | 0.712 | -1.03 | -- | -0.23 | 8.25 | 33.1 | 1242 | -- | -- |
| 87.03 | 0.434 | 9.07 | -2.48 | 0.599 | 0.926 | -- | -2.06 | -0.247 | 7.95 | 33.11 | 1243 | -- | -- |
| 87.22 | 0.435 | 9.03 | -2.18 | 0.595 | 0.693 | -- | -- | -0.249 | 7.98 | 33.1 | 1233 | -- | -- |
| 106.27 | 0.48 | 9.08 | -2.46 | -- | 0.914 | -- | -2.03 | -0.245 | -- | 33.3 | 1298 | -- | -- |
| 107.72 | 0.487 | 9.06 | -1.99 | 0.578 | -- | -1.01 | -- | -0.365 | 7.9 | -- | -- | -- | -- |
| 110.32 | 0.492 | 9.06 | -2.02 | 0.591 | -- | -- | -- | -0.366 | 7.36 | -- | -- | -- | -- |
| 106.33 | 0.48 | 9.05 | -2.17 | -- | 0.68 | -- | -- | -0.245 | -- | 33.23 | 1298 | -- | -- |
| 208.34 | 0.672 | 8.98 | -- | 0.594 | 0.539 | -- | -- | -0.0392 | 8.17 | 34.11 | 1017 | -- | -- |
| 128.93 | 0.531 | 9.07 | -2.01 | -- | -- | -- | -- | -0.356 | -- | -- | -- | -- | -- |
| 217.82 | 0.69 | 9.01 | -- | 0.574 | -- | -- | -- | -0.141 | 7.59 | -- | -- | -- | -- |
| 226.71 | 0.701 | 9.01 | -- | -- | 0.424 | -- | -- | -0.0578 | -- | 33.64 | 1298 | -- | -- |
| 235.48 | 0.716 | 9.02 | -- | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.24 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 2 | 83.62 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 3 | 83.86 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 16 | 17 |
| 4 | 83.90 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 5 | 83.92 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 37 | 84.14 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 38 | 84.15 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 42 | 84.18 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 93 | 84.94 | humidity | 60.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 95 | 84.98 | humidity | 60.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 151 | 85.28 | humidity | 60.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 156 | 85.30 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 263 | 85.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 339 | 86.30 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 340 | 86.33 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 358 | 86.36 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 437 | 86.68 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 514 | 86.88 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 536 | 86.91 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 16 | 14 |
| 552 | 86.98 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 620 | 87.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 623 | 87.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 686 | 87.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 784 | 87.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 785 | 87.89 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 804 | 87.97 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 806 | 87.97 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 807 | 87.99 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 808 | 87.99 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 809 | 87.99 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 811 | 87.99 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 812 | 87.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 818 | 87.99 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 819 | 87.99 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 830 | 88.00 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 866 | 88.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 867 | 88.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 868 | 88.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 869 | 88.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 878 | 88.22 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 910 | 88.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 916 | 88.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 946 | 88.37 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 982 | 88.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |