Os05g0367000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PHD finger-like domain protein 5A (Splicing factor 3B associated 14 kDa protein) (SF3b14b).
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Os05g0367000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PHD finger-like domain protein 5A (Splicing factor 3B associated 14 kDa protein) (SF3b14b).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.56 | 0.327 | 10.6 | -0.439 | 0.303 | 0.974 | 0.504 | 0.445 | -0.384 | 18.4 | 12.27 | 78 | -- | -- |
| 48.71 | 0.325 | 10.6 | -0.498 | 0.308 | 0.966 | 0.563 | -- | -0.399 | 18.2 | 12.04 | 78 | -- | -- |
| 49.14 | 0.327 | 10.6 | -0.421 | 0.306 | 0.992 | -- | 0.625 | -0.378 | 18.5 | 10.97 | 66 | -- | -- |
| 49.45 | 0.328 | 10.6 | -0.511 | 0.311 | 1 | -- | -- | -0.402 | 18.4 | 12.25 | 66 | -- | -- |
| 52.93 | 0.339 | 10.6 | -0.458 | -- | 1.19 | -- | 0.729 | -0.405 | -- | 9.61 | 122 | -- | -- |
| 57.97 | 0.357 | 10.6 | -0.31 | 0.529 | -- | 0.719 | -- | -0.265 | 16.8 | -- | -- | -- | -- |
| 59.3 | 0.361 | 10.6 | -0.307 | 0.533 | -- | -- | -- | -0.261 | 16.8 | -- | -- | -- | -- |
| 52.95 | 0.339 | 10.6 | -0.543 | -- | 1 | -- | -- | -0.431 | -- | 18.39 | 134 | -- | -- |
| 55.24 | 0.346 | 10.6 | -- | 0.333 | 0.646 | -- | -- | -0.326 | 17.8 | 19.02 | 78 | -- | -- |
| 74.34 | 0.403 | 10.6 | -0.327 | -- | -- | -- | -- | -0.275 | -- | -- | -- | -- | -- |
| 61.78 | 0.368 | 10.6 | -- | 0.538 | -- | -- | -- | -0.227 | 16.7 | -- | -- | -- | -- |
| 60.06 | 0.361 | 10.6 | -- | -- | 0.838 | -- | -- | -0.353 | -- | 19.6 | 122 | -- | -- |
| 77.16 | 0.41 | 10.6 | -- | -- | -- | -- | -- | -0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 2 | 43.06 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 3 | 43.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 82 | 45.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 102 | 46.13 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 168 | 47.29 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 196 | 47.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 208 | 47.79 | temperature | 30 | 90 | < th | dose independent | rect. | 4 | 15 |
| 221 | 47.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 224 | 47.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 241 | 48.07 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 16 |
| 243 | 48.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 256 | 48.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 267 | 48.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 272 | 48.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 279 | 48.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 291 | 48.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 299 | 48.48 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 311 | 48.53 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 327 | 48.60 | temperature | 25 | 270 | > th | dose dependent | sin | 9 | NA |
| 332 | 48.61 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 349 | 48.68 | wind | 9 | 14400 | > th | dose dependent | rect. | 21 | 17 |
| 369 | 48.76 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 20 |
| 389 | 48.84 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 406 | 48.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 20 |
| 410 | 48.89 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 21 |
| 414 | 48.91 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 437 | 48.97 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 454 | 49.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 455 | 49.02 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 21 |
| 466 | 49.04 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 551 | 49.25 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 20 |
| 607 | 49.36 | wind | 9 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 634 | 49.42 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 660 | 49.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 661 | 49.47 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 667 | 49.49 | wind | 9 | 14400 | > th | dose dependent | sin | 5 | NA |
| 671 | 49.50 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 688 | 49.54 | temperature | 25 | 270 | < th | dose independent | sin | 8 | NA |
| 719 | 49.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 752 | 49.65 | temperature | 10 | 90 | > th | dose dependent | sin | 3 | NA |
| 757 | 49.65 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 763 | 49.66 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 768 | 49.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 770 | 49.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 792 | 49.71 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 802 | 49.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 861 | 49.79 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 894 | 49.84 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 909 | 49.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 928 | 49.89 | wind | 9 | 14400 | < th | dose independent | rect. | 21 | 17 |