Os05g0361900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os05g0361900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.47 | 0.507 | 10.9 | -0.467 | 2.32 | 0.747 | 0.00989 | -0.256 | -0.701 | 20.6 | 25.2 | 328 | -- | -- |
| 116.31 | 0.502 | 10.9 | -0.389 | 2.33 | 0.727 | 0.0548 | -- | -0.675 | 20.6 | 25.41 | 335 | -- | -- |
| 116.27 | 0.502 | 10.9 | -0.46 | 2.31 | 0.758 | -- | -0.229 | -0.706 | 20.6 | 25.3 | 335 | -- | -- |
| 116.24 | 0.502 | 10.9 | -0.394 | 2.31 | 0.745 | -- | -- | -0.682 | 20.6 | 25.5 | 334 | -- | -- |
| 310.15 | 0.82 | 10.9 | -1.3 | -- | 2.14 | -- | -1.84 | -1.16 | -- | 26 | 585 | -- | -- |
| 139.8 | 0.554 | 10.8 | -0.182 | 2.71 | -- | -0.00943 | -- | -0.359 | 20.1 | -- | -- | -- | -- |
| 139.8 | 0.554 | 10.8 | -0.181 | 2.71 | -- | -- | -- | -0.359 | 20.1 | -- | -- | -- | -- |
| 312.55 | 0.823 | 10.9 | -0.827 | -- | 2.09 | -- | -- | -1.07 | -- | 25.8 | 556 | -- | -- |
| 120.08 | 0.51 | 10.9 | -- | 2.35 | 0.685 | -- | -- | -0.618 | 20.6 | 25.5 | 334 | -- | -- |
| 543.09 | 1.09 | 10.7 | -0.206 | -- | -- | -- | -- | -0.392 | -- | -- | -- | -- | -- |
| 140.66 | 0.555 | 10.8 | -- | 2.71 | -- | -- | -- | -0.339 | 20.1 | -- | -- | -- | -- |
| 328.84 | 0.845 | 10.9 | -- | -- | 1.98 | -- | -- | -0.942 | -- | 25.79 | 553 | -- | -- |
| 544.21 | 1.09 | 10.7 | -- | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.57 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 2 | 105.95 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 7 | 107.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 9 | 107.40 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 16 | 108.40 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 18 | 108.61 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 19 | 108.71 | temperature | 25.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 22 | 108.86 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 24 | 109.02 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 52 | 110.36 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 67 | 110.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 111 | 112.59 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 20 |
| 139 | 113.20 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 165 | 113.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 178 | 114.06 | temperature | 30.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 183 | 114.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 185 | 114.25 | radiation | 1.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 186 | 114.26 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 194 | 114.37 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 195 | 114.38 | temperature | 25.0 | 270 | < th | dose independent | sin | 2 | NA |
| 198 | 114.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 205 | 114.51 | temperature | 25.0 | 270 | > th | dose independent | sin | 2 | NA |
| 218 | 114.70 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 221 | 114.74 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 237 | 115.05 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 244 | 115.16 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 252 | 115.20 | temperature | 20.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 254 | 115.24 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 259 | 115.33 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 270 | 115.42 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 289 | 115.60 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 294 | 115.62 | radiation | 1.0 | 90 | > th | dose independent | sin | 8 | NA |
| 299 | 115.68 | wind | 9.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 302 | 115.71 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 316 | 115.75 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 336 | 115.93 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 8 |
| 360 | 116.19 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 384 | 116.39 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 388 | 116.41 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 12 |
| 436 | 116.70 | temperature | 10.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 437 | 116.70 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 438 | 116.70 | humidity | 50.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 441 | 116.70 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 442 | 116.70 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 446 | 116.71 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 462 | 116.85 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 6 |
| 464 | 116.85 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 497 | 117.13 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 7 |
| 502 | 117.15 | temperature | 10.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 517 | 117.25 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 529 | 117.28 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 531 | 117.29 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 541 | 117.36 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 18 |
| 543 | 117.36 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 564 | 117.53 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 569 | 117.57 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 574 | 117.66 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 632 | 117.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 634 | 117.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 635 | 117.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 638 | 117.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 639 | 117.92 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 645 | 117.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 659 | 117.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 4 |
| 661 | 117.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 664 | 117.98 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 679 | 118.02 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 713 | 118.17 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 715 | 118.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 22 |
| 727 | 118.21 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 781 | 118.40 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 3 |
| 783 | 118.40 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 784 | 118.41 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 17 |
| 793 | 118.46 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 806 | 118.52 | temperature | 25.0 | 270 | > th | dose independent | no | NA | NA |
| 827 | 118.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 830 | 118.54 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 832 | 118.54 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 833 | 118.54 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 835 | 118.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 837 | 118.55 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 840 | 118.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 843 | 118.55 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 844 | 118.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 852 | 118.62 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 22 |
| 855 | 118.63 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 896 | 118.78 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 923 | 118.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 925 | 118.87 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 940 | 118.94 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 948 | 118.98 | temperature | 25.0 | 270 | < th | dose independent | no | NA | NA |
| 953 | 119.00 | temperature | 25.0 | 720 | > th | dose independent | rect. | 8 | 3 |
| 956 | 119.01 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 18 |
| 989 | 119.12 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 990 | 119.12 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 994 | 119.14 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 998 | 119.16 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 22 |