FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0355900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.78 (0.0363) R2 : 0.00035
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0305 (0.0764) R2dN8 : 0.000452 R2N8 : 0.00035
σ : 0.683
deviance : 214.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
178.55 0.628 2.77 0.0958 0.0797 0.125 1.95 9.7 -0.0173 19.8 0.9498 259 6.38 0.8
195.71 0.652 2.74 0.111 0.0895 1.61 1.25 -- -0.034 20.4 0.00123 217 6.37 0.632
188.49 0.639 2.76 0.101 0.105 0.171 -- 8.8 -0.00283 23.4 0.9 289 6.38 0.815
194.81 0.65 2.77 -0.0563 0.0784 2.27 -- -- -0.00222 20.3 0.3721 217 6.37 0.466
188.9 0.64 2.77 0.0508 -- 0.15 -- 7.95 -0.0163 -- 0.935 275 6.37 0.79
211.81 0.682 2.78 0.115 0.00146 -- 0.92 -- -0.0217 19.5 -- -- -- --
213.9 0.685 2.78 0.09 0.0672 -- -- -- -0.0218 1.7 -- -- -- --
194.9 0.65 2.78 -0.0151 -- 2.56 -- -- -0.00346 -- 0.3803 218 6.38 0.459
194.11 0.649 2.78 -- 0.104 2.7 -- -- 0.0107 21.9 0.4 309 6.37 0.467
214.17 0.684 2.78 0.0927 -- -- -- -- -0.0203 -- -- -- -- --
214.11 0.684 2.78 -- 0.0688 -- -- -- -0.0318 1.74 -- -- -- --
194.42 0.649 2.78 -- -- 2.73 -- -- -0.0036 -- 0.3802 217 6.38 0.432
214.4 0.683 2.78 -- -- -- -- -- -0.0305 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 184.71 wind 1.0 270 < th dose dependent rect. 6 1
2 187.11 wind 1.0 270 < th dose independent rect. 6 1
3 187.16 wind 3.0 90 < th dose dependent rect. 6 5
7 188.92 wind 1.0 90 < th dose independent rect. 6 4
15 191.54 radiation 1.0 43200 < th dose dependent rect. 3 1
23 192.92 humidity 90.0 270 > th dose dependent rect. 6 1
71 195.81 atmosphere 1005.0 30 > th dose dependent rect. 2 1
73 195.83 wind 3.0 30 < th dose dependent rect. 2 1
76 195.91 temperature 15.0 30 > th dose dependent rect. 2 1
82 195.97 wind 1.0 30 < th dose independent rect. 2 1
88 196.00 humidity 80.0 30 > th dose independent rect. 2 1
90 196.02 temperature 20.0 30 > th dose independent rect. 2 1
91 196.02 atmosphere 1005.0 30 > th dose independent rect. 2 1
95 196.03 temperature 10.0 30 > th dose independent rect. 2 1
97 196.03 temperature 30.0 30 < th dose independent rect. 2 1
98 196.03 humidity 50.0 30 > th dose independent rect. 2 1
101 196.03 atmosphere 995.0 30 > th dose independent rect. 2 1
102 196.03 atmosphere 1010.0 30 < th dose independent rect. 2 1
104 196.03 radiation 1.0 30 < th dose independent rect. 2 1
109 196.03 precipitation 0.1 30 < th dose independent rect. 2 1
110 196.03 temperature 10.0 30 > th dose independent rect. 3 23
111 196.03 radiation 1.0 30 < th dose dependent rect. 2 1
116 196.03 precipitation 0.1 30 < th dose dependent rect. 2 1
118 196.04 humidity 50.0 30 > th dose dependent rect. 2 1
129 196.22 atmosphere 995.0 90 > th dose dependent rect. 6 5
130 196.25 temperature 20.0 270 > th dose independent rect. 6 2
132 196.26 atmosphere 1015.0 30 < th dose dependent rect. 2 1
135 196.32 wind 7.0 720 > th dose dependent rect. 12 1
148 196.57 temperature 30.0 30 < th dose dependent rect. 2 1
153 196.70 atmosphere 1010.0 90 > th dose independent rect. 23 11
162 196.85 radiation 1.0 270 > th dose independent rect. 6 2
170 196.99 wind 1.0 270 > th dose independent rect. 1 13
174 197.04 wind 9.0 720 > th dose independent rect. 12 1
177 197.06 radiation 1.0 90 < th dose independent sin 8 NA
184 197.19 wind 1.0 30 > th dose independent rect. 2 1
200 197.47 wind 9.0 1440 < th dose independent rect. 3 1
201 197.47 temperature 10.0 1440 > th dose independent rect. 3 1
204 197.47 temperature 30.0 1440 < th dose independent rect. 3 1
208 197.47 humidity 50.0 1440 > th dose independent rect. 3 1
217 197.47 atmosphere 995.0 1440 > th dose independent rect. 3 1
218 197.47 radiation 1.0 1440 < th dose independent rect. 3 1
238 197.47 temperature 10.0 1440 > th dose independent rect. 4 23
241 197.47 radiation 1.0 1440 < th dose dependent rect. 3 1
258 197.59 radiation 1.0 90 > th dose independent sin 8 NA
264 197.65 radiation 1.0 90 < th dose dependent sin 8 NA
303 197.73 wind 1.0 270 < th dose dependent rect. 4 15
304 197.74 atmosphere 995.0 270 > th dose dependent rect. 6 2
308 197.78 atmosphere 1010.0 10 > th dose independent rect. 23 12
374 198.07 atmosphere 995.0 30 > th dose independent rect. 3 23
399 198.27 humidity 90.0 270 > th dose independent rect. 6 1
404 198.29 temperature 30.0 90 < th dose independent rect. 6 13
406 198.30 atmosphere 995.0 270 > th dose dependent rect. 4 5
408 198.33 wind 1.0 90 < th dose dependent rect. 6 15
410 198.35 atmosphere 1000.0 10 > th dose dependent rect. 6 5
422 198.41 humidity 90.0 10 > th dose independent rect. 2 5
423 198.42 wind 9.0 1440 < th dose independent rect. 12 2
436 198.52 temperature 15.0 4320 > th dose independent rect. 11 7
438 198.52 humidity 90.0 270 > th dose dependent rect. 5 16
440 198.54 temperature 20.0 10 < th dose independent rect. 11 4
443 198.55 wind 1.0 90 < th dose dependent rect. 6 12
459 198.69 wind 5.0 720 < th dose independent rect. 18 2
469 198.76 wind 1.0 270 < th dose independent rect. 4 15
478 198.80 wind 9.0 1440 < th dose independent rect. 12 4
481 198.80 temperature 30.0 30 < th dose independent rect. 3 23
482 198.81 wind 9.0 90 < th dose dependent rect. 19 11
484 198.83 temperature 20.0 270 < th dose dependent rect. 10 4
495 198.94 humidity 90.0 270 > th dose independent rect. 11 1
496 198.94 precipitation 0.1 270 > th dose independent rect. 10 1
501 198.94 humidity 90.0 270 > th dose dependent rect. 11 1
502 198.94 precipitation 0.1 270 > th dose dependent rect. 10 1
506 198.95 temperature 20.0 270 < th dose independent rect. 10 1
507 198.95 temperature 20.0 270 < th dose dependent rect. 10 1
511 198.96 radiation 10.0 90 < th dose dependent rect. 19 11
513 198.97 radiation 1.0 10 < th dose dependent rect. 5 1
515 198.98 radiation 1.0 90 < th dose independent rect. 19 12
519 199.01 wind 9.0 10 < th dose dependent rect. 18 12
521 199.02 temperature 20.0 10 < th dose dependent rect. 12 2
524 199.04 temperature 25.0 90 < th dose independent rect. 7 2
532 199.10 temperature 20.0 270 < th dose independent rect. 10 3
539 199.12 radiation 1.0 10 < th dose dependent rect. 5 9
543 199.16 atmosphere 1015.0 4320 > th dose dependent rect. 14 1
546 199.17 radiation 1.0 90 > th dose independent rect. 5 6
560 199.19 atmosphere 1000.0 90 > th dose independent rect. 6 5
569 199.24 radiation 10.0 10 < th dose dependent sin 7 NA
572 199.25 wind 7.0 270 > th dose dependent rect. 19 1
579 199.29 humidity 50.0 270 > th dose dependent rect. 6 2
583 199.31 humidity 90.0 4320 < th dose independent rect. 14 3
586 199.33 humidity 90.0 4320 < th dose independent rect. 15 1
604 199.41 humidity 50.0 90 > th dose dependent rect. 19 11
608 199.42 atmosphere 995.0 90 > th dose dependent rect. 15 20
609 199.43 temperature 25.0 90 > th dose dependent rect. 1 3
610 199.43 temperature 15.0 10 > th dose dependent rect. 2 4
612 199.44 wind 9.0 1440 > th dose independent rect. 12 4
624 199.49 radiation 10.0 10 > th dose independent sin 9 NA
628 199.50 wind 7.0 90 < th dose independent rect. 11 19
630 199.51 temperature 30.0 90 < th dose independent rect. 6 5
651 199.60 precipitation 0.1 30 < th dose independent rect. 3 23
652 199.60 precipitation 0.1 30 < th dose dependent rect. 3 23
658 199.63 atmosphere 995.0 90 > th dose independent rect. 6 13
675 199.68 wind 7.0 90 < th dose independent rect. 19 11
681 199.71 atmosphere 1005.0 270 > th dose independent rect. 4 5
682 199.71 wind 9.0 90 < th dose dependent rect. 11 19
684 199.72 atmosphere 1010.0 10 < th dose independent rect. 9 22
690 199.74 atmosphere 1005.0 270 > th dose independent rect. 5 3
694 199.74 wind 9.0 1440 > th dose dependent rect. 12 4
704 199.77 humidity 80.0 10 > th dose dependent rect. 2 4
712 199.81 temperature 10.0 90 > th dose independent rect. 19 11
713 199.81 temperature 30.0 90 < th dose independent rect. 19 11
714 199.81 humidity 50.0 90 > th dose independent rect. 19 11
716 199.81 atmosphere 995.0 90 > th dose independent rect. 19 11
720 199.81 temperature 10.0 90 > th dose independent rect. 6 13
721 199.81 atmosphere 1015.0 90 < th dose independent rect. 6 13
735 199.87 atmosphere 1005.0 10 < th dose independent rect. 5 1
764 199.92 temperature 30.0 90 < th dose independent rect. 15 10
770 199.95 precipitation 0.1 90 < th dose independent rect. 6 5
772 199.95 precipitation 0.1 90 < th dose dependent rect. 6 5
773 199.96 precipitation 0.1 90 < th dose independent rect. 6 13
774 199.96 precipitation 0.1 90 < th dose dependent rect. 6 13
784 200.00 temperature 10.0 90 > th dose independent rect. 6 5
786 200.00 atmosphere 1015.0 90 < th dose independent rect. 6 5
788 200.00 temperature 10.0 90 > th dose independent rect. 11 19
801 200.02 atmosphere 1010.0 90 < th dose independent rect. 23 7
813 200.06 humidity 50.0 90 > th dose independent rect. 6 5
819 200.07 temperature 30.0 30 < th dose independent rect. 6 20
825 200.08 precipitation 0.1 270 < th dose independent rect. 8 22
831 200.08 precipitation 0.1 270 < th dose dependent rect. 8 22
833 200.09 atmosphere 1000.0 10 > th dose independent rect. 6 20
839 200.12 wind 9.0 90 < th dose independent rect. 6 5
847 200.16 temperature 10.0 270 > th dose dependent rect. 6 2
853 200.18 temperature 20.0 1440 > th dose independent rect. 11 1
863 200.21 temperature 15.0 4320 < th dose dependent rect. 10 8
869 200.24 precipitation 0.1 1440 > th dose independent rect. 10 1
874 200.24 precipitation 0.1 1440 > th dose dependent rect. 10 1
878 200.24 temperature 10.0 90 > th dose dependent rect. 6 5
891 200.26 humidity 80.0 270 > th dose independent rect. 2 1
923 200.33 atmosphere 995.0 90 > th dose dependent rect. 6 13
925 200.35 radiation 10.0 10 < th dose dependent rect. 14 12
926 200.36 temperature 15.0 4320 < th dose independent rect. 10 1
929 200.36 temperature 15.0 4320 < th dose dependent rect. 10 1
937 200.37 wind 5.0 30 < th dose dependent rect. 2 4
938 200.37 temperature 15.0 4320 < th dose dependent rect. 10 5
944 200.38 radiation 1.0 10 < th dose independent rect. 11 3
954 200.38 radiation 1.0 10 < th dose dependent rect. 11 3
988 200.40 radiation 1.0 10 < th dose independent rect. 13 1
999 200.40 radiation 1.0 10 < th dose dependent rect. 13 1