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Os05g0351500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sgf11, transcriptional regulation family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.12 (0.017) R2 : 0.0433
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.162 (0.0357) R2dN8 : 0.0559 R2N8 : 0.0433
σ : 0.319
deviance : 46.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.7 0.285 8.1 0.288 0.269 0.345 -0.0773 -0.271 0.234 1.68 70.13 1491 -- --
36.85 0.283 8.1 0.249 0.276 0.33 -0.0974 -- 0.225 1.68 70.02 1490 -- --
36.73 0.282 8.1 0.292 0.268 0.348 -- -0.28 0.235 1.68 70.17 1491 -- --
36.88 0.283 8.1 0.251 0.274 0.331 -- -- 0.222 1.69 70.33 1490 -- --
40.09 0.295 8.09 0.352 -- 0.424 -- -0.377 0.243 -- 71.22 1611 -- --
40.65 0.299 8.12 0.177 0.287 -- -0.173 -- 0.176 1.66 -- -- -- --
40.77 0.299 8.12 0.182 0.287 -- -- -- 0.177 1.65 -- -- -- --
40.4 0.297 8.11 0.206 -- 0.245 -- -- 0.17 -- 70.33 1490 -- --
38.47 0.289 8.11 -- 0.277 0.305 -- -- 0.192 1.75 71 1489 -- --
45.79 0.316 8.11 0.194 -- -- -- -- 0.184 -- -- -- -- --
41.64 0.302 8.12 -- 0.29 -- -- -- 0.157 1.67 -- -- -- --
41.52 0.301 8.12 -- -- 0.242 -- -- 0.147 -- 70.33 1490 -- --
46.78 0.319 8.12 -- -- -- -- -- 0.162 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.94 humidity 90.0 720 > th dose dependent rect. 20 1
4 34.48 humidity 80.0 1440 < th dose independent rect. 8 6
9 34.80 humidity 80.0 1440 < th dose independent rect. 6 8
11 34.83 humidity 80.0 1440 > th dose independent rect. 8 6
12 34.83 humidity 80.0 1440 > th dose independent rect. 6 8
25 34.95 humidity 70.0 1440 > th dose independent rect. 9 3
38 35.03 humidity 70.0 1440 < th dose independent rect. 9 2
45 35.07 humidity 70.0 1440 > th dose dependent rect. 11 1
52 35.10 humidity 80.0 1440 < th dose dependent rect. 9 2
54 35.12 humidity 80.0 1440 > th dose independent rect. 11 1
65 35.17 humidity 70.0 1440 > th dose dependent rect. 9 5
69 35.19 humidity 80.0 1440 < th dose independent sin 4 NA
81 35.22 atmosphere 995.0 90 > th dose dependent rect. 9 19
88 35.24 humidity 80.0 1440 > th dose independent sin 3 NA
100 35.27 radiation 10.0 1440 < th dose dependent rect. 11 7
108 35.29 radiation 10.0 1440 < th dose dependent rect. 11 10
117 35.31 humidity 80.0 1440 < th dose independent rect. 11 1
143 35.36 humidity 60.0 14400 < th dose independent rect. 6 1
145 35.36 humidity 60.0 14400 < th dose independent rect. 20 1
147 35.36 radiation 20.0 14400 > th dose independent rect. 17 1
201 35.36 humidity 60.0 14400 < th dose dependent rect. 6 1
203 35.36 humidity 60.0 14400 < th dose dependent rect. 20 1
205 35.36 radiation 20.0 14400 > th dose dependent rect. 17 1
264 35.37 radiation 10.0 1440 < th dose dependent rect. 13 5
269 35.38 radiation 1.0 270 < th dose independent rect. 3 16
283 35.40 radiation 10.0 1440 < th dose dependent rect. 13 8
284 35.40 radiation 10.0 1440 < th dose dependent rect. 13 10
300 35.43 radiation 10.0 1440 < th dose dependent sin 16 NA
353 35.49 wind 5.0 270 < th dose independent rect. 18 9
355 35.49 temperature 25.0 270 < th dose independent rect. 15 16
356 35.49 humidity 80.0 1440 < th dose dependent rect. 21 15
364 35.51 radiation 1.0 270 < th dose independent rect. 4 2
395 35.55 radiation 1.0 270 < th dose dependent rect. 3 16
412 35.57 humidity 70.0 270 > th dose dependent rect. 3 4
437 35.61 atmosphere 1010.0 270 < th dose independent rect. 3 17
446 35.63 radiation 20.0 1440 < th dose dependent rect. 16 1
468 35.69 radiation 1.0 270 < th dose independent rect. 4 4
480 35.70 precipitation 0.1 270 < th dose independent rect. 6 22
486 35.70 humidity 70.0 1440 > th dose dependent rect. 4 10
488 35.70 precipitation 0.1 270 < th dose dependent rect. 6 22
503 35.71 humidity 80.0 1440 < th dose dependent rect. 5 7
521 35.73 atmosphere 1005.0 270 > th dose independent rect. 20 7
535 35.74 wind 1.0 90 > th dose independent rect. 9 19
536 35.74 radiation 40.0 90 < th dose independent rect. 3 19
537 35.74 radiation 1.0 270 < th dose dependent rect. 4 2
538 35.74 radiation 20.0 270 < th dose dependent rect. 3 5
550 35.76 wind 1.0 90 > th dose independent rect. 4 5
551 35.76 radiation 1.0 90 > th dose independent rect. 9 10
626 35.81 humidity 80.0 1440 < th dose dependent sin 6 NA
634 35.81 humidity 50.0 270 > th dose dependent rect. 17 14
640 35.82 atmosphere 1005.0 270 > th dose independent rect. 22 4
653 35.82 atmosphere 995.0 270 > th dose dependent rect. 7 20
654 35.83 temperature 20.0 720 > th dose independent rect. 3 3
661 35.83 wind 9.0 270 < th dose dependent rect. 19 8
683 35.84 precipitation 0.1 270 < th dose independent rect. 7 20
701 35.84 precipitation 0.1 270 < th dose dependent rect. 7 20
703 35.85 radiation 40.0 1440 < th dose dependent rect. 16 1
744 35.87 humidity 80.0 270 > th dose independent rect. 3 4
767 35.89 precipitation 0.1 90 < th dose independent rect. 9 18
781 35.89 precipitation 0.1 90 < th dose dependent rect. 9 18
803 35.91 precipitation 0.1 270 < th dose independent rect. 3 16
805 35.91 radiation 40.0 10 < th dose independent rect. 4 18
816 35.91 precipitation 0.1 270 < th dose dependent rect. 3 16
819 35.92 radiation 1.0 1440 > th dose independent rect. 10 3
821 35.92 radiation 20.0 270 < th dose independent rect. 3 4
822 35.92 wind 1.0 10 > th dose independent rect. 4 5
835 35.93 humidity 90.0 720 > th dose independent rect. 20 1
836 35.93 radiation 1.0 720 > th dose independent rect. 15 4
839 35.93 wind 9.0 90 < th dose independent rect. 3 6
840 35.93 temperature 10.0 90 > th dose independent rect. 3 6
842 35.93 humidity 50.0 90 > th dose independent rect. 3 6
843 35.93 atmosphere 995.0 90 > th dose independent rect. 3 6
844 35.93 atmosphere 1015.0 90 < th dose independent rect. 3 6
847 35.93 humidity 50.0 270 > th dose independent rect. 7 8
856 35.93 temperature 10.0 90 > th dose independent rect. 9 18
877 35.94 temperature 30.0 90 < th dose independent rect. 3 6
879 35.94 humidity 60.0 14400 > th dose independent rect. 1 7
886 35.94 radiation 40.0 90 < th dose independent rect. 4 16
913 35.95 radiation 40.0 90 < th dose independent rect. 3 6
945 35.96 radiation 1.0 1440 > th dose dependent rect. 16 1
982 35.98 atmosphere 1000.0 270 > th dose independent rect. 7 8
985 35.98 wind 3.0 1440 < th dose dependent rect. 10 1