Os05g0345500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactose-binding like domain containing protein.
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Os05g0345500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galactose-binding like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.48 | 0.31 | 9.1 | -0.572 | 1.13 | 0.179 | -0.977 | 3.13 | 0.353 | 23.2 | 0.1104 | 4678 | -- | -- |
| 48.78 | 0.325 | 9.12 | -0.444 | 1.15 | 0.379 | -1.07 | -- | 0.4 | 23.2 | 0.5 | 6916 | -- | -- |
| 47.51 | 0.321 | 9.09 | -0.525 | 1.14 | 0.153 | -- | 3.11 | 0.354 | 23.1 | 0.1725 | 4659 | -- | -- |
| 51.9 | 0.336 | 9.12 | -0.461 | 1.14 | 0.426 | -- | -- | 0.397 | 23.1 | 0.5011 | 17033 | -- | -- |
| 124.68 | 0.52 | 9.04 | -0.397 | -- | -0.452 | -- | 4.22 | 0.347 | -- | 0.4374 | 2940 | -- | -- |
| 52.69 | 0.34 | 9.13 | -0.359 | 1.14 | -- | -0.943 | -- | 0.34 | 23.2 | -- | -- | -- | -- |
| 56.46 | 0.352 | 9.13 | -0.32 | 1.14 | -- | -- | -- | 0.345 | 23.1 | -- | -- | -- | -- |
| 131.48 | 0.534 | 9.1 | -0.454 | -- | 0.656 | -- | -- | 0.384 | -- | 0.61 | 2302 | -- | -- |
| 54.6 | 0.344 | 9.1 | -- | 1.15 | 0.388 | -- | -- | 0.473 | 23.1 | 0.3764 | 13532 | -- | -- |
| 138.06 | 0.549 | 9.1 | -0.293 | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
| 59.16 | 0.36 | 9.12 | -- | 1.14 | -- | -- | -- | 0.38 | 23.1 | -- | -- | -- | -- |
| 136.37 | 0.544 | 9.09 | -- | -- | 0.494 | -- | -- | 0.418 | -- | 0.7123 | 2198 | -- | -- |
| 140.33 | 0.553 | 9.1 | -- | -- | -- | -- | -- | 0.387 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 12 |
| 6 | 41.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 7 | 41.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 8 | 41.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 11 |
| 10 | 41.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 11 |
| 21 | 41.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 11 |
| 26 | 41.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 17 |
| 28 | 41.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 17 |
| 31 | 41.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 32 | 41.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 35 | 41.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 40 | 41.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 43 | 41.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 45 | 41.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 52 | 41.42 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 59 | 41.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 8 |
| 79 | 41.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 81 | 41.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 82 | 41.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 86 | 41.59 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 119 | 41.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 139 | 41.84 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 140 | 41.84 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 142 | 41.84 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 150 | 41.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 165 | 41.97 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 204 | 42.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 205 | 42.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 219 | 42.15 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 227 | 42.18 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 230 | 42.19 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 232 | 42.19 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 233 | 42.19 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 247 | 42.23 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 253 | 42.25 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 273 | 42.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 293 | 42.38 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 314 | 42.44 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 10 |
| 315 | 42.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 14 |
| 323 | 42.46 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 363 | 42.57 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 378 | 42.60 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 384 | 42.62 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 430 | 42.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 450 | 42.78 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 460 | 42.82 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 472 | 42.84 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 480 | 42.85 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 484 | 42.86 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 490 | 42.87 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 491 | 42.87 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 16 |
| 494 | 42.89 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 507 | 42.92 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 529 | 42.96 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 533 | 42.96 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 535 | 42.96 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 541 | 42.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 548 | 42.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 553 | 42.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 575 | 43.01 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 582 | 43.01 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 599 | 43.04 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 615 | 43.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 626 | 43.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 652 | 43.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 22 |
| 653 | 43.12 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 658 | 43.12 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 22 |
| 686 | 43.16 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 687 | 43.16 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 692 | 43.16 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 704 | 43.18 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 707 | 43.19 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 725 | 43.21 | humidity | 70.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 729 | 43.21 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 17 |
| 739 | 43.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 746 | 43.23 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 763 | 43.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 771 | 43.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 805 | 43.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 823 | 43.30 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 854 | 43.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 864 | 43.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 872 | 43.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 874 | 43.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |