Os05g0342100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Wound-induced WI12 family protein.
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Os05g0342100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Wound-induced WI12 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.32 | 0.429 | 2.91 | 0.12 | 0.144 | 2.39 | 0.362 | 1.78 | 0.0191 | 12.1 | 10.17 | 173 | -- | -- |
| 83.36 | 0.425 | 2.9 | 0.123 | 0.145 | 1.99 | 0.361 | -- | 0.0192 | 12 | 10.19 | 172 | -- | -- |
| 83.84 | 0.426 | 2.91 | 0.138 | 0.146 | 2.49 | -- | 2.3 | 0.0188 | 11.2 | 10.16 | 172 | -- | -- |
| 83.91 | 0.427 | 2.9 | 0.119 | 0.145 | 1.95 | -- | -- | 0.0218 | 11.3 | 10.2 | 172 | -- | -- |
| 85.16 | 0.43 | 2.91 | 0.137 | -- | 2.56 | -- | 2.5 | 0.0189 | -- | 10.13 | 175 | -- | -- |
| 90.08 | 0.445 | 2.91 | 0.0288 | 0.162 | -- | 0.285 | -- | -0.00962 | 12.5 | -- | -- | -- | -- |
| 90.43 | 0.445 | 2.91 | 0.0397 | 0.161 | -- | -- | -- | -0.00821 | 12.5 | -- | -- | -- | -- |
| 85.2 | 0.43 | 2.9 | 0.12 | -- | 1.99 | -- | -- | 0.0197 | -- | 10.2 | 173 | -- | -- |
| 84.29 | 0.428 | 2.9 | -- | 0.139 | 1.87 | -- | -- | 0.01 | 11.3 | 10.2 | 172 | -- | -- |
| 92.06 | 0.448 | 2.91 | 0.0342 | -- | -- | -- | -- | -0.0109 | -- | -- | -- | -- | -- |
| 90.47 | 0.445 | 2.91 | -- | 0.161 | -- | -- | -- | -0.0126 | 12.5 | -- | -- | -- | -- |
| 85.57 | 0.431 | 2.91 | -- | -- | 1.91 | -- | -- | 0.00567 | -- | 10.2 | 179 | -- | -- |
| 92.09 | 0.448 | 2.91 | -- | -- | -- | -- | -- | -0.0147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.76 | wind | 7 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 7 | 81.83 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 20 |
| 9 | 81.88 | wind | 7 | 30 | > th | dose independent | rect. | 17 | 2 |
| 13 | 82.01 | wind | 9 | 10 | > th | dose dependent | rect. | 17 | 18 |
| 23 | 82.30 | wind | 1 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 24 | 82.31 | wind | 9 | 10 | > th | dose dependent | sin | 12 | NA |
| 27 | 82.38 | wind | 1 | 10 | < th | dose independent | rect. | 11 | 1 |
| 33 | 82.43 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 7 |
| 117 | 82.65 | wind | 9 | 90 | > th | dose independent | rect. | 17 | 4 |
| 259 | 83.14 | wind | 9 | 90 | > th | dose independent | sin | 13 | NA |
| 262 | 83.14 | wind | 1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 311 | 83.33 | humidity | 50 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 360 | 83.43 | wind | 9 | 90 | < th | dose independent | sin | 14 | NA |
| 361 | 83.43 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 6 |
| 362 | 83.43 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 8 |
| 416 | 83.59 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 15 | 5 |
| 432 | 83.60 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 15 | 3 |
| 439 | 83.63 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 483 | 83.69 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 15 | 1 |
| 590 | 83.95 | wind | 1 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 672 | 84.28 | wind | 9 | 10 | < th | dose independent | sin | 13 | NA |
| 720 | 84.45 | wind | 1 | 90 | < th | dose independent | rect. | 10 | 1 |
| 773 | 84.62 | wind | 1 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 782 | 84.67 | wind | 1 | 720 | < th | dose independent | rect. | 24 | 2 |