Os05g0326400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0326400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.06 | 0.504 | 8.64 | -3.51 | 0.878 | 0.385 | -0.0633 | -7.55 | 0.606 | 19.2 | 25.39 | 4721 | -- | -- |
| 130.81 | 0.533 | 8.39 | -1.73 | 0.881 | -0.466 | -0.23 | -- | 0.963 | 19 | 29.29 | 1862 | -- | -- |
| 115.02 | 0.5 | 8.63 | -3.49 | 0.878 | 0.38 | -- | -7.54 | 0.612 | 19.2 | 25.55 | 4752 | -- | -- |
| 125.1 | 0.521 | 8.38 | -1.7 | 0.909 | -0.563 | -- | -- | 1.1 | 18.6 | 32.81 | 12690 | -- | -- |
| 153.65 | 0.577 | 8.67 | -4.06 | -- | 0.779 | -- | -10.3 | 0.591 | -- | 26.89 | 5032 | -- | -- |
| 137.32 | 0.549 | 8.4 | -1.76 | 0.891 | -- | -0.162 | -- | 0.994 | 19 | -- | -- | -- | -- |
| 137.39 | 0.549 | 8.4 | -1.75 | 0.89 | -- | -- | -- | 0.994 | 19.1 | -- | -- | -- | -- |
| 162.97 | 0.595 | 8.32 | -1.57 | -- | -0.679 | -- | -- | 1.18 | -- | 32.44 | 12786 | -- | -- |
| 144.23 | 0.559 | 8.28 | -- | 0.901 | -1.21 | -- | -- | 1.55 | 19.1 | 31.2 | 47520 | -- | -- |
| 179.15 | 0.625 | 8.38 | -1.77 | -- | -- | -- | -- | 0.978 | -- | -- | -- | -- | -- |
| 218.45 | 0.691 | 8.36 | -- | 0.91 | -- | -- | -- | 1.19 | 18.9 | -- | -- | -- | -- |
| 180.62 | 0.626 | 8.22 | -- | -- | -1.31 | -- | -- | 1.68 | -- | 23.63 | 47520 | -- | -- |
| 261.91 | 0.755 | 8.34 | -- | -- | -- | -- | -- | 1.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.73 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 2 | 104.80 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 4 | 105.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 5 | 105.59 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 6 | 105.71 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 18 | 106.34 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 19 | 106.37 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 20 | 106.38 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 23 | 106.43 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 93 | 106.78 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 107 | 106.85 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 174 | 107.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 258 | 107.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 259 | 107.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 274 | 107.76 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 303 | 107.85 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 330 | 107.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 335 | 107.96 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 393 | 108.15 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 443 | 108.30 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 489 | 108.41 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 502 | 108.44 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 516 | 108.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 518 | 108.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 529 | 108.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 533 | 108.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 542 | 108.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 552 | 108.53 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 560 | 108.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 645 | 108.70 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 707 | 108.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 745 | 108.89 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 770 | 108.93 | wind | 5.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 809 | 109.00 | wind | 5.0 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 839 | 109.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 844 | 109.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 853 | 109.06 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 893 | 109.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 940 | 109.18 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 1 |