Os05g0324600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os05g0324600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.15 | 0.711 | 3.38 | -1.94 | 0.668 | 1.55 | 0.375 | -5.26 | -0.256 | 6.05 | 24.75 | 1310 | -- | -- |
| 241.54 | 0.724 | 3.24 | -0.741 | 0.71 | 1.37 | 0.435 | -- | -0.0442 | 6.11 | 0.8042 | 2471 | -- | -- |
| 229.44 | 0.705 | 3.38 | -1.92 | 0.671 | 1.55 | -- | -5.26 | -0.242 | 6.09 | 24.98 | 1308 | -- | -- |
| 238.56 | 0.719 | 3.24 | -0.662 | 0.673 | 1.57 | -- | -- | -0.0304 | 6.09 | 7.276 | 1236 | -- | -- |
| 252.09 | 0.739 | 3.39 | -1.82 | -- | 1.56 | -- | -4.56 | -0.28 | -- | 23.88 | 1304 | -- | -- |
| 278.4 | 0.782 | 3.18 | -0.198 | 0.752 | -- | 0.403 | -- | 0.242 | 5.3 | -- | -- | -- | -- |
| 278.8 | 0.782 | 3.18 | -0.197 | 0.754 | -- | -- | -- | 0.24 | 5.29 | -- | -- | -- | -- |
| 261.58 | 0.753 | 3.26 | -0.686 | -- | 1.66 | -- | -- | -0.0416 | -- | 7.585 | 1292 | -- | -- |
| 248.94 | 0.735 | 3.22 | -- | 0.679 | 1.29 | -- | -- | 0.077 | 6 | 12.63 | 1231 | -- | -- |
| 308.48 | 0.821 | 3.19 | -0.171 | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
| 279.83 | 0.783 | 3.18 | -- | 0.751 | -- | -- | -- | 0.262 | 5.3 | -- | -- | -- | -- |
| 269.02 | 0.764 | 3.23 | -- | -- | 1.04 | -- | -- | 0.0857 | -- | 21.77 | 1283 | -- | -- |
| 309.26 | 0.821 | 3.19 | -- | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 222.79 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 3 | 224.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 4 | 224.09 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 20 | 224.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 23 | 224.68 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 44 | 226.35 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 54 | 227.09 | humidity | 70 | 720 | < th | dose independent | rect. | 19 | 1 |
| 67 | 227.43 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 102 | 228.23 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 105 | 228.47 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 138 | 229.23 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 142 | 229.46 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 145 | 229.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 152 | 229.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 5 |
| 171 | 230.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 174 | 230.22 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 188 | 230.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 190 | 230.53 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 210 | 230.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 212 | 230.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 235 | 230.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 265 | 230.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 276 | 231.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 282 | 231.04 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 287 | 231.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 354 | 231.24 | humidity | 60 | 1440 | > th | dose independent | rect. | 18 | 14 |
| 367 | 231.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 374 | 231.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 387 | 231.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 393 | 231.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 401 | 231.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 462 | 231.54 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 531 | 231.76 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 552 | 231.82 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 702 | 232.22 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 4 |
| 814 | 232.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 819 | 232.58 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 895 | 232.81 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |