Os05g0324000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0324000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128 | 0.532 | 6.66 | 2.63 | 1.35 | 0.667 | -1.55 | 0.0748 | 0.783 | 18.5 | 17.62 | 1278 | -- | -- |
| 127.85 | 0.527 | 6.66 | 2.65 | 1.35 | 0.67 | -1.56 | -- | 0.788 | 18.5 | 17.07 | 1274 | -- | -- |
| 133.77 | 0.539 | 6.66 | 2.65 | 1.34 | 0.667 | -- | 0.24 | 0.783 | 18.5 | 17.08 | 1274 | -- | -- |
| 133.91 | 0.539 | 6.66 | 2.67 | 1.34 | 0.667 | -- | -- | 0.783 | 18.5 | 17.08 | 1274 | -- | -- |
| 220.88 | 0.692 | 6.64 | 2.61 | -- | 0.585 | -- | 0.354 | 0.759 | -- | 17.03 | 1398 | -- | -- |
| 143.93 | 0.562 | 6.69 | 2.56 | 1.3 | -- | -1.52 | -- | 0.63 | 18.1 | -- | -- | -- | -- |
| 149.52 | 0.573 | 6.69 | 2.57 | 1.29 | -- | -- | -- | 0.625 | 18 | -- | -- | -- | -- |
| 221.01 | 0.692 | 6.64 | 2.64 | -- | 0.618 | -- | -- | 0.752 | -- | 16.94 | 1397 | -- | -- |
| 296.21 | 0.802 | 6.65 | -- | 1.28 | 0.615 | -- | -- | 0.498 | 18.1 | 9.962 | 4325 | -- | -- |
| 236.31 | 0.718 | 6.67 | 2.53 | -- | -- | -- | -- | 0.595 | -- | -- | -- | -- | -- |
| 323.76 | 0.842 | 6.76 | -- | 1.26 | -- | -- | -- | 0.338 | 18.1 | -- | -- | -- | -- |
| 356.06 | 0.879 | 6.66 | -- | -- | 1.39 | -- | -- | 0.446 | -- | 9.972 | 4313 | -- | -- |
| 405.6 | 0.94 | 6.73 | -- | -- | -- | -- | -- | 0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.28 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 122.57 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 21 | 124.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 26 | 124.35 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 31 | 124.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 32 | 124.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 34 | 124.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 67 | 125.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 81 | 125.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 90 | 125.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 108 | 125.93 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 115 | 125.98 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 117 | 126.00 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 118 | 126.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 122 | 126.02 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 132 | 126.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 16 |
| 137 | 126.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 144 | 126.13 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 8 |
| 149 | 126.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 154 | 126.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 157 | 126.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 173 | 126.29 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 11 |
| 183 | 126.37 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 7 |
| 205 | 126.49 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 218 | 126.54 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 219 | 126.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 228 | 126.64 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 253 | 126.79 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 263 | 126.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 269 | 126.87 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 279 | 126.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 294 | 127.02 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 295 | 127.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 299 | 127.04 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 336 | 127.14 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 349 | 127.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 371 | 127.27 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 382 | 127.34 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 392 | 127.37 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 399 | 127.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 401 | 127.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 419 | 127.44 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 424 | 127.46 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 441 | 127.52 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 455 | 127.56 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 21 |
| 459 | 127.60 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 475 | 127.64 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 476 | 127.64 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 493 | 127.69 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 502 | 127.71 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 11 |
| 504 | 127.71 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 505 | 127.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 511 | 127.74 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 513 | 127.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 518 | 127.75 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 533 | 127.77 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 562 | 127.83 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 564 | 127.84 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 578 | 127.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 580 | 127.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 585 | 127.91 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 589 | 127.93 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 593 | 127.94 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 594 | 127.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 615 | 128.01 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 15 |
| 623 | 128.03 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 633 | 128.05 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 670 | 128.12 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 679 | 128.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 682 | 128.14 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 22 |
| 697 | 128.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 699 | 128.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 716 | 128.24 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 733 | 128.28 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 759 | 128.34 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 763 | 128.35 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 765 | 128.35 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 784 | 128.39 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 840 | 128.46 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 854 | 128.49 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 906 | 128.51 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 16 |
| 913 | 128.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 938 | 128.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 975 | 128.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 978 | 128.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 994 | 128.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 998 | 128.65 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |