Os05g0307000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0307000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 356.69 | 0.887 | 8.29 | 0.331 | 0.629 | 3.08 | -1.09 | 4.29 | -0.464 | 16.4 | 24.8 | 770 | -- | -- |
| 381.72 | 0.91 | 8.19 | 1.15 | 0.687 | 2.9 | -1.34 | -- | -0.255 | 16.8 | 25.18 | 726 | -- | -- |
| 359.61 | 0.883 | 8.29 | 0.328 | 0.669 | 3.09 | -- | 4.26 | -0.461 | 16.5 | 24.87 | 723 | -- | -- |
| 384.31 | 0.913 | 8.21 | 1.06 | 0.687 | 2.68 | -- | -- | -0.307 | 16.4 | 25.16 | 707 | -- | -- |
| 377.78 | 0.905 | 8.3 | 0.308 | -- | 3.18 | -- | 4.48 | -0.481 | -- | 24.89 | 882 | -- | -- |
| 489.93 | 1.04 | 8.32 | 0.318 | 0.749 | -- | -0.476 | -- | -0.869 | 14.5 | -- | -- | -- | -- |
| 490.63 | 1.04 | 8.32 | 0.305 | 0.745 | -- | -- | -- | -0.873 | 14.3 | -- | -- | -- | -- |
| 402.66 | 0.935 | 8.19 | 1.09 | -- | 2.77 | -- | -- | -0.29 | -- | 25.3 | 952 | -- | -- |
| 409.63 | 0.943 | 8.24 | -- | 0.728 | 2.21 | -- | -- | -0.486 | 15.8 | 25.2 | 602 | -- | -- |
| 523.66 | 1.07 | 8.33 | 0.274 | -- | -- | -- | -- | -0.891 | -- | -- | -- | -- | -- |
| 493.09 | 1.04 | 8.33 | -- | 0.739 | -- | -- | -- | -0.907 | 14.3 | -- | -- | -- | -- |
| 429.7 | 0.965 | 8.24 | -- | -- | 2.3 | -- | -- | -0.502 | -- | 25.3 | 897 | -- | -- |
| 525.64 | 1.07 | 8.34 | -- | -- | -- | -- | -- | -0.921 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 347.05 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 10 | 350.51 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 20 |
| 65 | 356.09 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 80 | 356.97 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 85 | 357.09 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 86 | 357.12 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 88 | 357.15 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 99 | 357.71 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 133 | 359.45 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 173 | 361.07 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 193 | 361.49 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 278 | 364.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 280 | 364.10 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 313 | 364.76 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 374 | 366.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 375 | 366.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 384 | 366.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 492 | 368.58 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 602 | 370.20 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 609 | 370.23 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 618 | 370.43 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 678 | 371.04 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 706 | 371.39 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 783 | 372.09 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 785 | 372.10 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 978 | 374.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |