Os05g0296200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0296200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.33 | 0.562 | 2.79 | 0.0168 | 0.0785 | 1.29 | -0.311 | 1.39 | 0.035 | 9.58 | 1016 | 4464 | -- | -- |
| 143.61 | 0.558 | 2.78 | 0.0523 | 0.0589 | 1.02 | -0.18 | -- | 0.0268 | 9.35 | 1017 | 3881 | -- | -- |
| 143.56 | 0.558 | 2.8 | 0.00392 | 0.0842 | 1.63 | -- | 2.16 | 0.0382 | 10.1 | 1016 | 4423 | -- | -- |
| 143.7 | 0.558 | 2.78 | 0.0475 | 0.062 | 1.04 | -- | -- | 0.0253 | 10.7 | 1017 | 3886 | -- | -- |
| 143.94 | 0.559 | 2.8 | 0.00125 | -- | 1.59 | -- | 2.06 | 0.0275 | -- | 1016 | 4423 | -- | -- |
| 150.21 | 0.575 | 2.79 | -0.0663 | 0.0824 | -- | -0.308 | -- | -0.022 | 11 | -- | -- | -- | -- |
| 150.61 | 0.575 | 2.79 | -0.0786 | 0.084 | -- | -- | -- | -0.0229 | 11.4 | -- | -- | -- | -- |
| 143.95 | 0.559 | 2.78 | 0.0409 | -- | 1.04 | -- | -- | 0.0228 | -- | 1016 | 3881 | -- | -- |
| 143.75 | 0.558 | 2.78 | -- | 0.0641 | 1.02 | -- | -- | 0.0175 | 10.7 | 1017 | 3881 | -- | -- |
| 151.05 | 0.574 | 2.79 | -0.0807 | -- | -- | -- | -- | -0.0237 | -- | -- | -- | -- | -- |
| 150.77 | 0.574 | 2.79 | -- | 0.0848 | -- | -- | -- | -0.0141 | 11.4 | -- | -- | -- | -- |
| 144 | 0.559 | 2.79 | -- | -- | 1.03 | -- | -- | 0.0157 | -- | 1016 | 3881 | -- | -- |
| 151.22 | 0.574 | 2.79 | -- | -- | -- | -- | -- | -0.0148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.01 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 4 | 131.01 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 39 | 131.01 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 42 | 131.01 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 115 | 138.58 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 5 |
| 119 | 138.95 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 9 | 2 |
| 120 | 138.95 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 4 |
| 128 | 139.15 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 130 | 139.15 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 157 | 139.50 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 193 | 140.00 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 195 | 140.05 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 197 | 140.08 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 201 | 140.14 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 297 | 140.96 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 298 | 140.98 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 301 | 140.99 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 322 | 141.08 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 9 |
| 383 | 141.45 | humidity | 90.0 | 30 | > th | dose independent | rect. | 7 | 12 |
| 384 | 141.49 | temperature | 15.0 | 720 | < th | dose independent | sin | 6 | NA |
| 408 | 141.66 | temperature | 15.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 409 | 141.67 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 4 |
| 416 | 141.67 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 4 |
| 426 | 141.69 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 5 |
| 435 | 141.74 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 455 | 141.83 | temperature | 15.0 | 720 | > th | dose independent | rect. | 21 | 11 |
| 458 | 141.89 | radiation | 1.0 | 90 | < th | dose independent | rect. | 11 | 6 |
| 488 | 142.05 | temperature | 15.0 | 720 | > th | dose independent | sin | 7 | NA |
| 491 | 142.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 505 | 142.10 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 507 | 142.10 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 528 | 142.10 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 530 | 142.10 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 566 | 142.22 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 659 | 142.59 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 15 |
| 668 | 142.63 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 704 | 142.79 | temperature | 15.0 | 720 | > th | dose independent | rect. | 20 | 15 |
| 740 | 142.98 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 13 |
| 755 | 143.04 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 756 | 143.06 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 758 | 143.06 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 761 | 143.07 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 20 | NA |
| 797 | 143.18 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 11 |
| 799 | 143.19 | humidity | 90.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 810 | 143.22 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 14 |
| 827 | 143.28 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 860 | 143.39 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 13 |
| 870 | 143.42 | temperature | 15.0 | 720 | > th | dose independent | rect. | 20 | 17 |
| 879 | 143.45 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 21 | 4 |
| 894 | 143.47 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 903 | 143.51 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 3 |
| 930 | 143.60 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 935 | 143.62 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 13 |
| 988 | 143.71 | atmosphere | 1010.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 992 | 143.73 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 7 |