Os05g0290300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : N-acetylglucosaminyl transferase component family protein.
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Os05g0290300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : N-acetylglucosaminyl transferase component family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.28 | 0.222 | 9.28 | 0.664 | 0.464 | -0.134 | -0.551 | -1.27 | 0.408 | 0.756 | 23.64 | 2065 | -- | -- |
| 25.04 | 0.233 | 9.33 | 0.247 | 0.456 | -0.201 | -0.369 | -- | 0.298 | 0.761 | 24.18 | 2015 | -- | -- |
| 22.85 | 0.223 | 9.29 | 0.623 | 0.478 | -0.174 | -- | -1.17 | 0.387 | 0.768 | 22.6 | 1909 | -- | -- |
| 25.82 | 0.237 | 9.33 | 0.223 | 0.45 | -0.206 | -- | -- | 0.278 | 0.887 | 24.18 | 2110 | -- | -- |
| 36.62 | 0.282 | 9.29 | 0.606 | -- | -0.245 | -- | -1.14 | 0.366 | -- | 22.58 | 2252 | -- | -- |
| 26.42 | 0.241 | 9.32 | 0.263 | 0.482 | -- | -0.473 | -- | 0.345 | 0.773 | -- | -- | -- | -- |
| 27.37 | 0.245 | 9.32 | 0.28 | 0.483 | -- | -- | -- | 0.348 | 0.757 | -- | -- | -- | -- |
| 36.38 | 0.281 | 9.35 | 0.22 | -- | -0.311 | -- | -- | 0.246 | -- | 24.7 | 963 | -- | -- |
| 26.77 | 0.241 | 9.35 | -- | 0.45 | -0.227 | -- | -- | 0.256 | 0.876 | 24.2 | 2112 | -- | -- |
| 41.93 | 0.303 | 9.31 | 0.298 | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
| 29.44 | 0.254 | 9.33 | -- | 0.487 | -- | -- | -- | 0.317 | 0.783 | -- | -- | -- | -- |
| 36.86 | 0.283 | 9.34 | -- | -- | -0.387 | -- | -- | 0.178 | -- | 24.9 | 954 | -- | -- |
| 44.27 | 0.311 | 9.32 | -- | -- | -- | -- | -- | 0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.84 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 2 | 20.86 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 26 | 22.06 | wind | 3 | 14400 | < th | dose dependent | sin | 13 | NA |
| 31 | 22.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 32 | 22.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 4 |
| 37 | 22.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 46 | 22.26 | wind | 3 | 14400 | < th | dose dependent | rect. | 15 | 16 |
| 47 | 22.26 | wind | 3 | 14400 | < th | dose dependent | rect. | 15 | 21 |
| 56 | 22.28 | wind | 3 | 14400 | < th | dose dependent | rect. | 15 | 18 |
| 57 | 22.28 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 65 | 22.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 74 | 22.32 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 82 | 22.33 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 83 | 22.33 | wind | 1 | 14400 | < th | dose independent | rect. | 19 | 7 |
| 93 | 22.34 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 94 | 22.34 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 111 | 22.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 149 | 22.40 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 150 | 22.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 163 | 22.42 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 176 | 22.42 | wind | 3 | 14400 | < th | dose dependent | rect. | 19 | 21 |
| 209 | 22.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 231 | 22.49 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 267 | 22.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 17 |
| 269 | 22.52 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 286 | 22.54 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 310 | 22.55 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 312 | 22.56 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 359 | 22.59 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 369 | 22.59 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 378 | 22.60 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 387 | 22.60 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 18 |
| 405 | 22.61 | wind | 3 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 408 | 22.62 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 440 | 22.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 463 | 22.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 467 | 22.65 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 469 | 22.65 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 491 | 22.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 21 |
| 505 | 22.66 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 533 | 22.67 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 557 | 22.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 559 | 22.68 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 569 | 22.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 10 |
| 571 | 22.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 11 |
| 602 | 22.69 | wind | 1 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 630 | 22.70 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 631 | 22.70 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 710 | 22.72 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 22 |
| 773 | 22.73 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 776 | 22.73 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 23 |
| 803 | 22.75 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 907 | 22.78 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 909 | 22.78 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |