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Os05g0285900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.95 (0.0124) R2 : 0.0342
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.105 (0.0262) R2dN8 : 0.0441 R2N8 : 0.0342
σ : 0.234
deviance : 25.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.6 0.191 8.98 -0.587 0.0538 0.0949 0.282 -0.709 0.0107 20.4 40.07 715 -- --
17.16 0.193 8.97 -0.536 0.0889 0.0564 0.102 -- 0.0307 20.1 29.4 1544 -- --
16.81 0.191 8.98 -0.59 0.0572 0.087 -- -0.625 0.0144 20 40.03 676 -- --
17.16 0.193 8.97 -0.545 0.0942 0.0687 -- -- 0.0301 19.1 29.97 1537 -- --
17 0.192 8.98 -0.592 -- 0.086 -- -0.586 0.0124 -- 40.08 684 -- --
17.33 0.195 8.97 -0.526 0.0936 -- 0.101 -- 0.0478 19.6 -- -- -- --
17.34 0.195 8.97 -0.528 0.0958 -- -- -- 0.0483 19 -- -- -- --
17.42 0.194 8.97 -0.54 -- 0.089 -- -- 0.032 -- 40.24 773 -- --
22.98 0.223 8.99 -- 0.0887 0.281 -- -- 0.048 18.5 49.83 7990 -- --
17.83 0.197 8.96 -0.529 -- -- -- -- 0.0465 -- -- -- -- --
24.68 0.232 8.95 -- 0.102 -- -- -- 0.107 18.7 -- -- -- --
20.84 0.213 8.94 -- -- 0.327 -- -- 0.149 -- 49.53 46109 -- --
25.22 0.234 8.95 -- -- -- -- -- 0.105 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.41 temperature 25.0 4320 > th dose independent rect. 1 1
2 15.41 temperature 25.0 270 > th dose independent rect. 24 7
5 15.48 temperature 25.0 270 > th dose dependent rect. 24 7
6 15.49 temperature 25.0 720 > th dose dependent rect. 24 2
10 15.50 temperature 25.0 720 > th dose dependent rect. 20 11
15 15.54 temperature 25.0 720 > th dose dependent rect. 20 6
30 15.58 temperature 25.0 90 > th dose dependent rect. 1 5
43 15.60 temperature 25.0 4320 < th dose independent rect. 1 1
75 15.65 temperature 25.0 720 > th dose independent rect. 20 11
80 15.66 wind 9.0 720 < th dose independent rect. 7 8
87 15.67 radiation 10.0 30 < th dose independent rect. 19 23
113 15.73 atmosphere 1005.0 30 > th dose independent rect. 7 12
149 15.78 temperature 15.0 720 > th dose independent rect. 7 8
154 15.79 wind 9.0 720 < th dose independent rect. 3 16
188 15.84 radiation 40.0 720 < th dose independent rect. 15 16
190 15.84 temperature 20.0 10 > th dose dependent rect. 2 5
195 15.85 atmosphere 1015.0 720 < th dose independent rect. 7 8
196 15.85 temperature 15.0 720 > th dose independent rect. 3 16
197 15.85 temperature 10.0 720 > th dose independent rect. 15 16
198 15.85 humidity 60.0 30 > th dose dependent rect. 18 1
212 15.88 temperature 30.0 30 < th dose independent rect. 18 1
213 15.88 temperature 25.0 720 < th dose independent rect. 23 6
214 15.88 atmosphere 1015.0 720 < th dose independent rect. 3 16
218 15.88 atmosphere 1000.0 30 > th dose dependent rect. 7 12
220 15.89 atmosphere 1005.0 30 > th dose dependent rect. 18 1
222 15.89 humidity 80.0 4320 < th dose dependent rect. 23 4
229 15.90 humidity 70.0 30 > th dose independent rect. 18 1
235 15.90 atmosphere 1005.0 30 > th dose independent rect. 9 10
236 15.90 atmosphere 995.0 720 > th dose independent rect. 15 16
253 15.92 atmosphere 1000.0 720 > th dose dependent rect. 7 1
255 15.92 temperature 20.0 10 > th dose dependent rect. 24 7
260 15.93 precipitation 0.1 720 < th dose independent rect. 7 8
263 15.93 atmosphere 995.0 720 > th dose dependent rect. 19 1
267 15.93 precipitation 0.1 720 < th dose dependent rect. 7 8
272 15.94 temperature 10.0 720 > th dose independent rect. 19 8
273 15.94 temperature 30.0 720 < th dose independent rect. 19 8
275 15.94 humidity 50.0 720 > th dose independent rect. 19 8
277 15.94 atmosphere 995.0 720 > th dose independent rect. 19 8
278 15.94 radiation 1.0 720 < th dose independent rect. 19 8
288 15.94 radiation 1.0 720 < th dose dependent rect. 19 8
301 15.95 humidity 80.0 4320 < th dose dependent rect. 1 1
314 15.96 wind 1.0 10 > th dose independent rect. 18 10
316 15.96 temperature 30.0 30 < th dose dependent rect. 18 1
328 15.97 atmosphere 1000.0 30 > th dose independent rect. 19 23
351 15.99 atmosphere 1000.0 30 > th dose dependent rect. 24 7
367 16.01 temperature 20.0 10 > th dose independent rect. 2 5
369 16.01 wind 9.0 720 < th dose independent rect. 19 8
371 16.01 atmosphere 1000.0 30 > th dose independent rect. 15 16
379 16.01 radiation 10.0 43200 < th dose dependent rect. 19 8
381 16.02 atmosphere 1005.0 270 > th dose dependent rect. 24 4
410 16.04 radiation 20.0 30 < th dose dependent rect. 19 23
414 16.05 atmosphere 1000.0 30 > th dose independent rect. 24 7
418 16.05 radiation 1.0 30 < th dose dependent rect. 18 1
427 16.06 atmosphere 1005.0 30 > th dose independent rect. 7 8
446 16.08 precipitation 0.1 720 < th dose independent rect. 19 16
447 16.08 atmosphere 1005.0 270 > th dose dependent rect. 2 1
454 16.08 temperature 10.0 30 > th dose dependent rect. 2 16
455 16.08 precipitation 0.1 720 < th dose dependent rect. 19 16
456 16.09 atmosphere 1000.0 720 > th dose independent rect. 19 1
465 16.09 atmosphere 1000.0 30 > th dose dependent rect. 7 8
475 16.10 atmosphere 1000.0 30 > th dose independent rect. 19 12
482 16.11 radiation 1.0 30 < th dose independent rect. 18 1
483 16.11 humidity 80.0 4320 < th dose independent rect. 23 4
485 16.11 humidity 50.0 720 > th dose independent rect. 19 16
486 16.11 wind 7.0 30 < th dose independent rect. 3 23
487 16.11 wind 1.0 4320 < th dose dependent rect. 4 2
512 16.13 humidity 70.0 720 > th dose independent rect. 19 1
513 16.13 wind 1.0 4320 < th dose independent rect. 4 2
518 16.13 precipitation 0.1 720 < th dose independent rect. 19 8
532 16.13 precipitation 0.1 720 < th dose dependent rect. 19 8
538 16.14 wind 1.0 4320 > th dose independent rect. 4 2
542 16.14 precipitation 0.1 720 < th dose independent rect. 15 16
543 16.14 atmosphere 1000.0 30 > th dose independent rect. 13 18
557 16.14 precipitation 0.1 720 < th dose dependent rect. 15 16
559 16.15 humidity 80.0 4320 > th dose independent rect. 24 1
568 16.15 wind 5.0 30 < th dose independent rect. 18 8
571 16.15 wind 9.0 720 < th dose independent rect. 15 16
572 16.15 precipitation 0.1 720 < th dose independent rect. 7 16
578 16.15 precipitation 0.1 720 < th dose dependent rect. 7 16
581 16.16 wind 1.0 4320 > th dose independent rect. 23 7
584 16.16 atmosphere 1005.0 30 > th dose independent rect. 7 17
594 16.17 temperature 25.0 720 > th dose independent sin 11 NA
596 16.17 atmosphere 1005.0 30 > th dose independent rect. 18 1
602 16.17 radiation 10.0 30 < th dose independent rect. 2 16
612 16.17 atmosphere 1005.0 30 > th dose dependent rect. 9 10
616 16.18 wind 7.0 30 < th dose independent rect. 18 1
617 16.18 temperature 25.0 30 > th dose independent rect. 18 1
654 16.19 humidity 80.0 30 < th dose independent rect. 18 1
662 16.19 precipitation 0.1 720 < th dose independent rect. 11 8
665 16.19 wind 9.0 30 < th dose dependent rect. 18 1
677 16.19 precipitation 0.1 720 < th dose dependent rect. 11 8
685 16.20 wind 1.0 30 > th dose independent rect. 18 1
688 16.20 temperature 10.0 30 > th dose independent rect. 18 1
692 16.20 atmosphere 995.0 30 > th dose independent rect. 18 1
694 16.20 atmosphere 1010.0 30 < th dose independent rect. 18 1
696 16.20 radiation 20.0 30 < th dose independent rect. 18 1
699 16.20 precipitation 0.1 30 < th dose independent rect. 18 1
704 16.20 wind 1.0 4320 < th dose independent rect. 23 7
709 16.20 atmosphere 995.0 720 > th dose independent rect. 7 16
714 16.20 temperature 10.0 30 > th dose independent rect. 19 23
718 16.20 precipitation 0.1 30 < th dose dependent rect. 18 1
737 16.21 wind 1.0 90 > th dose independent rect. 24 7
739 16.21 atmosphere 995.0 720 > th dose independent rect. 11 8
745 16.21 wind 1.0 30 > th dose dependent rect. 18 1
752 16.21 radiation 10.0 43200 < th dose dependent rect. 19 6
762 16.22 temperature 10.0 1440 > th dose independent rect. 19 1
765 16.22 temperature 30.0 1440 < th dose independent rect. 19 1
769 16.22 humidity 50.0 1440 > th dose independent rect. 19 1
776 16.22 radiation 1.0 1440 < th dose independent rect. 19 1
809 16.22 temperature 10.0 1440 > th dose independent rect. 20 23
812 16.22 precipitation 0.1 30 < th dose independent rect. 19 23
814 16.22 temperature 10.0 30 > th dose dependent rect. 18 1
815 16.22 humidity 50.0 720 > th dose dependent rect. 19 1
816 16.22 radiation 1.0 1440 < th dose dependent rect. 19 1
833 16.22 wind 1.0 4320 < th dose dependent rect. 23 7
837 16.22 precipitation 0.1 30 < th dose dependent rect. 19 23
845 16.23 atmosphere 1005.0 30 > th dose independent rect. 9 6
849 16.23 atmosphere 1005.0 30 > th dose independent rect. 9 15
850 16.23 humidity 50.0 30 > th dose independent rect. 3 23
879 16.24 radiation 10.0 10 < th dose independent rect. 24 12
882 16.24 wind 7.0 720 > th dose independent rect. 19 15
894 16.24 atmosphere 1000.0 30 > th dose dependent rect. 7 6
907 16.25 humidity 80.0 4320 < th dose independent rect. 2 1
909 16.25 wind 1.0 4320 < th dose independent rect. 1 5
915 16.25 humidity 70.0 30 > th dose independent rect. 18 8
917 16.25 wind 9.0 720 < th dose independent rect. 7 16
918 16.25 radiation 10.0 30 < th dose independent rect. 24 18
919 16.25 precipitation 0.1 720 < th dose independent rect. 20 23
921 16.25 atmosphere 1015.0 30 < th dose dependent rect. 18 1
936 16.25 atmosphere 1000.0 90 > th dose dependent rect. 7 16
938 16.25 precipitation 0.1 720 < th dose dependent rect. 20 23
949 16.26 wind 9.0 720 < th dose independent rect. 11 8
951 16.26 temperature 10.0 720 > th dose independent rect. 23 8
955 16.26 humidity 50.0 720 > th dose independent rect. 23 8
957 16.26 atmosphere 995.0 720 > th dose independent rect. 23 8
958 16.26 radiation 30.0 720 < th dose independent rect. 23 8
964 16.26 temperature 10.0 720 > th dose independent rect. 7 16
965 16.26 atmosphere 995.0 720 > th dose independent rect. 8 23
986 16.27 wind 9.0 720 < th dose independent rect. 23 8
992 16.27 radiation 10.0 10 < th dose independent rect. 2 14
994 16.27 radiation 10.0 10 < th dose independent rect. 24 16
996 16.27 humidity 90.0 30 < th dose dependent rect. 18 1