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Os05g0275600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.9 (0.0177) R2 : 0.0451
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.173 (0.0373) R2dN8 : 0.0582 R2N8 : 0.0451
σ : 0.333
deviance : 51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.57 0.251 6.9 0.225 0.6 -0.275 0.366 -0.627 0.2 2.91 70.14 1130 -- --
29.29 0.252 6.88 0.307 0.607 -0.316 0.327 -- 0.233 2.82 70.05 1122 -- --
28.99 0.251 6.89 0.235 0.601 -0.28 -- -0.498 0.203 2.92 70.36 1118 -- --
29.41 0.253 6.89 0.289 0.587 -0.325 -- -- 0.215 2.77 71.04 1084 -- --
40.23 0.297 6.89 0.285 -- -0.298 -- -0.119 0.198 -- 73 1817 -- --
32.41 0.267 6.89 0.245 0.543 -- 0.223 -- 0.189 3.44 -- -- -- --
32.57 0.267 6.89 0.241 0.544 -- -- -- 0.188 3.45 -- -- -- --
40.31 0.297 6.89 0.288 -- -0.298 -- -- 0.199 -- 73 1817 -- --
31.65 0.262 6.89 -- 0.586 -0.325 -- -- 0.211 3.06 71.07 2533 -- --
49.17 0.328 6.89 0.264 -- -- -- -- 0.202 -- -- -- -- --
34.1 0.273 6.9 -- 0.549 -- -- -- 0.161 3.44 -- -- -- --
41.76 0.302 6.9 -- -- -0.294 -- -- 0.179 -- 75 1824 -- --
51 0.333 6.9 -- -- -- -- -- 0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.85 wind 1.0 43200 < th dose independent rect. 1 1
2 27.94 wind 1.0 43200 > th dose independent rect. 1 1
3 27.98 wind 1.0 43200 < th dose dependent rect. 1 1
4 28.20 humidity 80.0 43200 > th dose independent rect. 4 1
5 28.20 humidity 80.0 43200 < th dose dependent rect. 2 3
6 28.21 humidity 80.0 43200 < th dose dependent rect. 3 1
15 28.23 wind 3.0 43200 > th dose independent rect. 6 1
16 28.23 wind 3.0 43200 < th dose independent rect. 6 1
21 28.25 humidity 80.0 43200 < th dose independent rect. 3 2
22 28.25 wind 5.0 43200 < th dose dependent rect. 6 1
41 28.32 wind 1.0 43200 > th dose dependent rect. 6 1
61 28.36 wind 3.0 43200 < th dose dependent rect. 1 12
64 28.37 wind 3.0 43200 < th dose dependent rect. 3 10
72 28.39 precipitation 0.1 4320 < th dose independent rect. 2 15
76 28.39 precipitation 0.1 4320 < th dose dependent rect. 2 15
82 28.40 precipitation 0.1 4320 > th dose independent rect. 2 15
89 28.41 precipitation 0.1 14400 > th dose dependent rect. 22 22
90 28.42 humidity 80.0 43200 < th dose independent rect. 24 1
105 28.44 precipitation 0.1 14400 > th dose independent rect. 13 16
106 28.44 precipitation 0.1 14400 < th dose independent rect. 13 16
116 28.44 precipitation 0.1 14400 < th dose dependent rect. 13 16
134 28.45 precipitation 0.1 14400 < th dose independent rect. 2 18
143 28.45 precipitation 0.1 14400 < th dose dependent rect. 2 18
152 28.46 precipitation 0.1 14400 > th dose independent rect. 2 18
161 28.46 precipitation 0.1 14400 > th dose independent rect. 23 22
162 28.46 precipitation 0.1 14400 < th dose independent rect. 23 22
172 28.46 precipitation 0.1 14400 < th dose dependent rect. 23 22
198 28.47 precipitation 0.1 14400 > th dose independent rect. 21 23
199 28.47 precipitation 0.1 14400 < th dose independent rect. 21 23
216 28.47 precipitation 0.1 14400 < th dose dependent rect. 21 23
251 28.49 precipitation 0.1 14400 < th dose independent rect. 13 7
276 28.49 precipitation 0.1 14400 < th dose dependent rect. 13 7
294 28.50 precipitation 0.1 14400 > th dose independent rect. 13 7
328 28.51 precipitation 0.1 14400 > th dose independent rect. 16 4
329 28.51 precipitation 0.1 14400 < th dose independent rect. 16 4
330 28.51 precipitation 0.1 4320 < th dose independent rect. 2 7
331 28.51 precipitation 0.1 14400 > th dose independent rect. 11 9
346 28.51 precipitation 0.1 14400 < th dose dependent rect. 16 4
348 28.51 precipitation 0.1 4320 < th dose dependent rect. 2 7
351 28.51 radiation 1.0 1440 > th dose dependent rect. 17 17
359 28.52 precipitation 0.1 4320 > th dose independent rect. 2 7
379 28.52 precipitation 0.1 4320 > th dose dependent rect. 2 4
396 28.53 wind 3.0 14400 < th dose independent rect. 3 1
397 28.53 precipitation 0.1 4320 < th dose independent rect. 2 4
420 28.53 precipitation 0.1 4320 < th dose dependent rect. 2 4
422 28.53 precipitation 0.1 4320 > th dose dependent rect. 2 7
427 28.53 wind 1.0 43200 < th dose dependent rect. 19 18
437 28.54 precipitation 0.1 14400 > th dose independent no NA NA
438 28.54 precipitation 0.1 14400 < th dose independent no NA NA
439 28.54 precipitation 0.1 14400 < th dose independent rect. 16 1
457 28.54 precipitation 0.1 14400 > th dose independent rect. 15 23
460 28.54 precipitation 0.1 14400 < th dose independent rect. 15 23
462 28.54 precipitation 0.1 14400 < th dose dependent no NA NA
464 28.54 precipitation 0.1 14400 < th dose dependent rect. 16 1
476 28.54 precipitation 0.1 14400 < th dose dependent rect. 15 23
480 28.55 precipitation 0.1 4320 > th dose independent rect. 2 4
484 28.55 wind 3.0 43200 < th dose independent rect. 2 12
498 28.55 precipitation 0.1 14400 > th dose dependent rect. 13 17
504 28.56 precipitation 0.1 14400 > th dose independent rect. 16 1
544 28.57 precipitation 0.1 14400 < th dose independent rect. 13 4
564 28.57 precipitation 0.1 14400 < th dose dependent rect. 13 4
565 28.57 radiation 1.0 1440 > th dose dependent rect. 4 6
595 28.58 precipitation 0.1 14400 > th dose independent rect. 13 4
596 28.58 precipitation 0.1 14400 > th dose independent rect. 11 6
602 28.58 wind 3.0 43200 > th dose independent rect. 2 13
611 28.58 radiation 10.0 1440 < th dose independent rect. 17 17
618 28.58 radiation 1.0 1440 > th dose dependent rect. 6 4
629 28.58 radiation 40.0 1440 < th dose dependent rect. 17 17
638 28.59 precipitation 0.1 4320 > th dose independent sin 4 NA
639 28.59 precipitation 0.1 4320 < th dose independent sin 4 NA
650 28.59 wind 3.0 43200 < th dose dependent sin 6 NA
651 28.59 precipitation 0.1 14400 > th dose dependent sin 2 NA
652 28.59 precipitation 0.1 4320 < th dose dependent sin 4 NA
653 28.59 precipitation 0.1 14400 > th dose dependent rect. 16 1
669 28.60 precipitation 0.1 14400 > th dose independent sin 16 NA
670 28.60 precipitation 0.1 14400 < th dose independent sin 16 NA
673 28.60 precipitation 0.1 14400 < th dose independent rect. 11 6
682 28.60 precipitation 0.1 14400 < th dose dependent sin 16 NA
686 28.60 precipitation 0.1 14400 < th dose dependent rect. 11 6
687 28.60 wind 3.0 43200 < th dose dependent rect. 24 7
721 28.61 wind 3.0 43200 < th dose dependent rect. 6 3
723 28.61 precipitation 0.1 14400 > th dose dependent rect. 11 6
730 28.61 precipitation 0.1 4320 > th dose dependent rect. 2 15
761 28.62 precipitation 0.1 14400 > th dose independent rect. 19 23
762 28.62 precipitation 0.1 14400 < th dose independent rect. 19 23
764 28.62 precipitation 0.1 14400 > th dose dependent no NA NA
781 28.62 precipitation 0.1 14400 > th dose dependent rect. 15 23
782 28.62 precipitation 0.1 14400 < th dose dependent rect. 19 23
809 28.63 precipitation 0.1 14400 > th dose dependent rect. 2 23
815 28.64 wind 3.0 14400 > th dose independent rect. 3 1
818 28.64 wind 3.0 43200 < th dose independent rect. 2 5
866 28.65 radiation 40.0 1440 < th dose dependent rect. 6 4
905 28.66 radiation 20.0 1440 < th dose dependent rect. 7 1
915 28.66 wind 1.0 43200 < th dose dependent rect. 21 16
925 28.67 humidity 80.0 14400 < th dose independent rect. 13 1
927 28.67 radiation 40.0 1440 < th dose independent rect. 8 2
965 28.68 wind 3.0 43200 > th dose independent rect. 11 2
967 28.68 radiation 10.0 1440 < th dose independent rect. 6 4
968 28.68 radiation 40.0 1440 < th dose independent rect. 6 4
973 28.68 radiation 10.0 1440 < th dose independent rect. 4 6
980 28.68 radiation 10.0 1440 < th dose independent rect. 24 10
983 28.68 radiation 10.0 1440 < th dose independent rect. 22 12