BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0275600 Os05g0275600|AK069275
         (205 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61415.1  | chr1:22659661-22660420 FORWARD LENGTH=168           96   1e-20
AT1G61450.1  | chr1:22673322-22673921 FORWARD LENGTH=121           85   2e-17

>AT1G61415.1 | chr1:22659661-22660420 FORWARD LENGTH=168
          Length = 167

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 73/116 (62%)

Query: 3   EDSGAILRHISSLKDMLDKVNEEIEENIQKTREIESEIVKHSETEKEYIMKESELMKGVS 62
           EDSGAIL  IS  KDMLD+VN EIE NIQ TREIES+I   SETE    +KE+EL K   
Sbjct: 2   EDSGAILCQISIFKDMLDQVNREIEANIQVTREIESQIGNCSETESALSVKEAELTKSFL 61

Query: 63  IAEFELNGIIQVAAAETDSLKVMEGNLEFQKATLNGIRKRFSNKMEKFINESKGFQ 118
            ++FE+NG+I V A   +SLK++E  +   +   + +  R + K E F+    GFQ
Sbjct: 62  ASQFEINGLISVTADSRNSLKLLEDEICRLRNEHSELITRLTEKREGFVKMCFGFQ 117



>AT1G61450.1 | chr1:22673322-22673921 FORWARD LENGTH=121
          Length = 120

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 58/84 (69%)

Query: 3  EDSGAILRHISSLKDMLDKVNEEIEENIQKTREIESEIVKHSETEKEYIMKESELMKGVS 62
          EDSGAIL  IS  KDMLD+VN EIE NIQ TREIES+I   SE E    +KE EL +   
Sbjct: 2  EDSGAILCQISIFKDMLDQVNREIEANIQVTREIESQIGACSEIESSLSLKEPELTRSFL 61

Query: 63 IAEFELNGIIQVAAAETDSLKVME 86
           ++FE++G+I V A   +SLK++E
Sbjct: 62 ASQFEISGLISVTADSRNSLKLLE 85



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.308    0.126    0.314 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,492,340
Number of extensions: 126055
Number of successful extensions: 829
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 829
Number of HSP's successfully gapped: 2
Length of query: 205
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 111
Effective length of database: 8,529,465
Effective search space: 946770615
Effective search space used: 946770615
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 109 (46.6 bits)