Os05g0274300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0274300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.13 | 0.286 | 9.92 | -0.449 | 0.51 | 0.95 | -0.173 | -0.972 | -0.145 | 4.82 | 11.18 | 615 | -- | -- |
| 37.8 | 0.286 | 9.9 | -0.284 | 0.526 | 0.949 | -0.00115 | -- | -0.107 | 4.75 | 14.11 | 587 | -- | -- |
| 37.17 | 0.284 | 9.92 | -0.437 | 0.524 | 0.958 | -- | -0.918 | -0.142 | 4.73 | 10.85 | 584 | -- | -- |
| 37.79 | 0.286 | 9.9 | -0.279 | 0.527 | 0.94 | -- | -- | -0.0995 | 4.74 | 13.82 | 587 | -- | -- |
| 42.93 | 0.305 | 9.94 | -0.484 | -- | 0.882 | -- | -0.884 | -0.155 | -- | 14.4 | 1142 | -- | -- |
| 48.25 | 0.326 | 9.88 | -0.0569 | 0.373 | -- | -0.078 | -- | 0.0421 | 3.12 | -- | -- | -- | -- |
| 48.27 | 0.325 | 9.88 | -0.0553 | 0.373 | -- | -- | -- | 0.0426 | 3.1 | -- | -- | -- | -- |
| 43.79 | 0.308 | 9.91 | -0.296 | -- | 0.859 | -- | -- | -0.0983 | -- | 14.19 | 1132 | -- | -- |
| 39.61 | 0.293 | 9.89 | -- | 0.502 | 0.812 | -- | -- | -0.0524 | 4.56 | 13 | 573 | -- | -- |
| 56.2 | 0.35 | 9.87 | -0.0394 | -- | -- | -- | -- | 0.0523 | -- | -- | -- | -- | -- |
| 48.35 | 0.325 | 9.87 | -- | 0.372 | -- | -- | -- | 0.0487 | 3.09 | -- | -- | -- | -- |
| 45.82 | 0.315 | 9.9 | -- | -- | 0.737 | -- | -- | -0.0475 | -- | 12.98 | 1122 | -- | -- |
| 56.24 | 0.35 | 9.87 | -- | -- | -- | -- | -- | 0.0567 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 3 | 36.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 4 | 36.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 5 | 36.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 11 | 36.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 25 | 37.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 66 | 37.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 68 | 37.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 70 | 37.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 82 | 37.18 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 89 | 37.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 134 | 37.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 151 | 37.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 166 | 37.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 178 | 37.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 227 | 37.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 270 | 37.41 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 519 | 37.60 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 522 | 37.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 549 | 37.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 22 |
| 560 | 37.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 607 | 37.67 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 726 | 37.75 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |