Os05g0268400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Major facilitator superfamily antiporter.
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Os05g0268400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Major facilitator superfamily antiporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 465.4 | 1.01 | 3.77 | -0.56 | 1.22 | 0.712 | 1.28 | 2.57 | -0.919 | 17.7 | 998.4 | 4034 | -- | -- |
| 470.38 | 1.01 | 3.79 | -0.654 | 1.21 | 1.06 | 1.22 | -- | -0.898 | 17.8 | 999 | 4326 | -- | -- |
| 469.41 | 1.01 | 3.77 | -0.57 | 1.23 | 0.712 | -- | 2.57 | -0.917 | 17.7 | 998.4 | 4031 | -- | -- |
| 474.4 | 1.01 | 3.79 | -0.671 | 1.22 | 1.07 | -- | -- | -0.9 | 17.8 | 999 | 4326 | -- | -- |
| 547.19 | 1.09 | 3.75 | -0.606 | -- | 0.728 | -- | 2.54 | -0.932 | -- | 998.4 | 4024 | -- | -- |
| 497.3 | 1.05 | 3.81 | -0.496 | 1.22 | -- | 1.28 | -- | -0.993 | 17.7 | -- | -- | -- | -- |
| 501.35 | 1.05 | 3.81 | -0.504 | 1.23 | -- | -- | -- | -0.988 | 17.7 | -- | -- | -- | -- |
| 551.96 | 1.09 | 3.77 | -0.712 | -- | 1.09 | -- | -- | -0.929 | -- | 998.9 | 4326 | -- | -- |
| 485.85 | 1.03 | 3.78 | -- | 1.23 | 1.05 | -- | -- | -0.839 | 17.7 | 998.9 | 4085 | -- | -- |
| 579.7 | 1.13 | 3.79 | -0.543 | -- | -- | -- | -- | -1.02 | -- | -- | -- | -- | -- |
| 508.05 | 1.05 | 3.8 | -- | 1.24 | -- | -- | -- | -0.932 | 17.7 | -- | -- | -- | -- |
| 564.81 | 1.11 | 3.75 | -- | -- | 1 | -- | -- | -0.861 | -- | 999 | 4090 | -- | -- |
| 587.47 | 1.13 | 3.78 | -- | -- | -- | -- | -- | -0.957 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 450.93 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 2 | 452.58 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 3 | 453.59 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 4 | 453.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 6 | 454.77 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 9 | 456.22 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 10 | 456.25 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 12 | 456.34 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 15 | 456.50 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 18 | 456.66 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 19 | 456.87 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 24 | 457.08 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 24 | 13 |
| 25 | 457.12 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 26 | 457.12 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 34 | 457.50 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 51 | 458.22 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 57 | 458.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 61 | 458.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 65 | 458.74 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 75 | 459.12 | temperature | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 89 | 459.61 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 94 | 459.95 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 95 | 459.96 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 114 | 460.32 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 120 | 460.46 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 143 | 460.80 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 148 | 460.93 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 160 | 461.23 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 11 |
| 167 | 461.40 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 191 | 461.47 | temperature | 10.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 194 | 461.49 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 195 | 461.49 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 198 | 461.50 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 210 | 461.71 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 215 | 461.74 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 226 | 461.85 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 248 | 461.95 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 251 | 461.96 | humidity | 90.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 260 | 462.04 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 262 | 462.05 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 284 | 462.09 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 285 | 462.10 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 291 | 462.14 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 292 | 462.15 | wind | 7.0 | 720 | > th | dose independent | rect. | 8 | 1 |
| 295 | 462.17 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 315 | 462.34 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 333 | 462.41 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 343 | 462.48 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 346 | 462.50 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 351 | 462.52 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 13 |
| 356 | 462.56 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 369 | 462.61 | humidity | 90.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 395 | 462.74 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 396 | 462.75 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 404 | 462.77 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 2 | 15 |
| 405 | 462.78 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 444 | 462.98 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 447 | 462.99 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 480 | 463.16 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 481 | 463.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 514 | 463.27 | wind | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 580 | 463.47 | wind | 7.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 606 | 463.53 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 612 | 463.56 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 641 | 463.67 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 662 | 463.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 667 | 463.75 | wind | 7.0 | 720 | > th | dose independent | rect. | 2 | 7 |
| 688 | 463.81 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 691 | 463.81 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 701 | 463.84 | atmosphere | 1005.0 | 4320 | < th | dose dependent | sin | 10 | NA |
| 707 | 463.85 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 11 |
| 755 | 464.02 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 769 | 464.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 821 | 464.19 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 903 | 464.38 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 913 | 464.40 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 994 | 464.56 | atmosphere | 1000.0 | 4320 | < th | dose independent | sin | 9 | NA |