Os05g0251500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Similarities with spP29295 Saccharomyces cerevisiae YPL204w HRR25 casein kinase I.
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Os05g0251500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Similarities with spP29295 Saccharomyces cerevisiae YPL204w HRR25 casein kinase I.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.8 | 0.281 | 11.2 | -0.94 | 0.203 | 0.744 | -0.102 | -1 | -0.196 | 9.3 | 21.4 | 2466 | -- | -- |
| 37.52 | 0.285 | 11.2 | -0.779 | 0.199 | 0.992 | -0.0254 | -- | -0.108 | 9.29 | 19.6 | 2504 | -- | -- |
| 35.83 | 0.279 | 11.2 | -0.942 | 0.202 | 0.743 | -- | -0.997 | -0.194 | 9.4 | 21.38 | 2463 | -- | -- |
| 37.51 | 0.285 | 11.2 | -0.783 | 0.196 | 1.01 | -- | -- | -0.114 | 9.58 | 19.52 | 2509 | -- | -- |
| 38.17 | 0.288 | 11.2 | -0.942 | -- | 0.74 | -- | -0.987 | -0.193 | -- | 21.4 | 2583 | -- | -- |
| 56.25 | 0.352 | 11.1 | -0.272 | 0.168 | -- | -0.162 | -- | 0.111 | 7.88 | -- | -- | -- | -- |
| 56.31 | 0.351 | 11.1 | -0.276 | 0.168 | -- | -- | -- | 0.112 | 8.29 | -- | -- | -- | -- |
| 38.75 | 0.29 | 11.2 | -0.821 | -- | 1.19 | -- | -- | -0.101 | -- | 18.44 | 2748 | -- | -- |
| 46.16 | 0.316 | 11.1 | -- | 0.202 | 0.535 | -- | -- | -0.0226 | 8.99 | 22.3 | 2082 | -- | -- |
| 57.87 | 0.355 | 11.1 | -0.275 | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
| 58.31 | 0.357 | 11.1 | -- | 0.167 | -- | -- | -- | 0.142 | 8.41 | -- | -- | -- | -- |
| 46.74 | 0.318 | 11.1 | -- | -- | 0.554 | -- | -- | -0.026 | -- | 22.3 | 1383 | -- | -- |
| 59.86 | 0.361 | 11.1 | -- | -- | -- | -- | -- | 0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 26 | 35.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 61 | 35.58 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 83 | 35.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 89 | 35.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 98 | 35.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 99 | 35.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 18 |
| 119 | 35.82 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 167 | 35.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 255 | 36.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 505 | 36.49 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 819 | 36.92 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 885 | 37.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 989 | 37.13 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 996 | 37.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |