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Os05g0232200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.82 (0.0312) R2 : 0.878
β1 : -2.77 (0.113) R2dD : 0.167 R2D : 0.133
β2 : 6.51 (0.184) R2dC : 1.76 R2C : 0.291
β3 : -2.73 (0.172) R2dE : 0.353 R2E : -1.03
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.946 (0.066) R2dN8 : 0.0761 R2N8 : 0.00863
σ : 0.577
deviance : 153.62
__
_____
C
peak time of C : 6.52
E
wheather : humidity
threshold : 44.62
memory length : 305
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 22
open length of G : 9.76

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
137.45 0.551 8.81 -2.72 6.47 -2.76 0.947 1.64 -0.94 6.45 49.25 297 21.9 9.9
139.45 0.55 8.81 -2.83 6.45 -2.66 2.35 -- -0.937 6.49 45.29 268 22.2 10
137.25 0.546 8.8 -2.69 6.46 -2.75 -- 2.42 -0.938 6.53 46.37 318 21.9 9.7
153.62 0.577 8.82 -2.77 6.51 -2.73 -- -- -0.946 6.52 44.62 305 22 9.76
838.5 1.35 8.94 -3.09 -- 1.35 -- 1.9 -0.646 -- 37.47 36597 22.4 8.64
184.82 0.637 8.87 -2.91 3.94 -- 1.96 -- -0.988 7.29 -- -- -- --
195.19 0.654 8.87 -2.87 3.94 -- -- -- -0.992 7.31 -- -- -- --
559.34 1.1 8.95 -2.57 -- 3.66 -- -- -0.631 -- 36.81 20750 22.5 8.38
355.73 0.878 8.74 -- 6.98 -3.17 -- -- -0.71 6.64 40.3 337 22.3 9.32
1020.55 1.49 8.96 -2.8 -- -- -- -- -0.925 -- -- -- -- --
411.9 0.949 8.8 -- 3.92 -- -- -- -0.672 7.36 -- -- -- --
495.26 1.04 9.09 -- -- 5.24 -- -- -0.574 -- 34.34 2198 20.1 9.24
1227.36 1.64 8.89 -- -- -- -- -- -0.615 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 138.36 humidity 50.0 270 > th dose dependent rect. 22 10
7 141.09 wind 1.0 90 > th dose dependent rect. 14 7
8 141.78 precipitation 0.1 270 < th dose independent rect. 8 15
9 141.78 precipitation 0.1 270 < th dose dependent rect. 8 15
10 141.91 precipitation 0.1 270 < th dose independent rect. 17 20
11 141.91 precipitation 0.1 270 < th dose dependent rect. 17 20
15 142.28 humidity 70.0 270 > th dose independent rect. 23 9
16 142.32 temperature 10.0 270 > th dose independent rect. 23 9
17 142.32 temperature 30.0 270 < th dose independent rect. 23 9
18 142.32 humidity 50.0 270 > th dose independent rect. 23 9
20 142.32 atmosphere 995.0 270 > th dose independent rect. 23 9
21 142.32 temperature 10.0 270 > th dose independent rect. 8 15
22 142.38 wind 9.0 270 < th dose independent rect. 23 9
23 142.48 radiation 40.0 270 < th dose independent rect. 23 9
26 143.01 temperature 20.0 270 > th dose independent rect. 13 4
27 143.29 precipitation 0.1 270 < th dose independent rect. 18 18
28 143.29 precipitation 0.1 270 < th dose dependent rect. 18 18
31 143.40 temperature 20.0 270 > th dose independent rect. 12 6
34 143.58 wind 1.0 270 > th dose dependent rect. 13 4
41 144.03 radiation 40.0 270 < th dose dependent rect. 23 9
42 144.10 wind 1.0 270 > th dose independent rect. 13 4
43 144.13 temperature 10.0 270 > th dose independent rect. 13 4
45 144.13 atmosphere 1010.0 270 < th dose independent rect. 13 4
47 144.13 precipitation 0.1 270 < th dose independent rect. 23 9
48 144.13 temperature 10.0 270 > th dose independent rect. 17 20
49 144.13 precipitation 0.1 270 < th dose dependent rect. 23 9
50 144.15 wind 9.0 270 < th dose independent rect. 13 4
52 144.22 atmosphere 1010.0 270 < th dose independent rect. 12 7
55 144.29 atmosphere 1015.0 270 < th dose independent rect. 23 9
56 144.30 wind 1.0 270 > th dose independent rect. 12 6
57 144.31 wind 9.0 270 < th dose independent rect. 12 7
58 144.31 temperature 10.0 270 > th dose independent rect. 12 7
61 144.31 temperature 10.0 270 > th dose independent rect. 19 17
62 144.31 atmosphere 995.0 270 > th dose independent rect. 19 17
66 144.34 humidity 90.0 270 < th dose independent rect. 13 4
76 144.56 wind 9.0 270 < th dose independent rect. 8 15
77 144.59 wind 1.0 10 > th dose dependent rect. 14 7
78 144.61 wind 1.0 270 > th dose dependent rect. 12 6
87 144.75 precipitation 0.1 270 < th dose independent rect. 13 4
88 144.75 precipitation 0.1 270 < th dose dependent rect. 13 4
93 144.87 atmosphere 995.0 270 > th dose independent rect. 12 7
94 144.87 wind 9.0 270 < th dose independent rect. 19 17
95 144.93 humidity 50.0 10 > th dose dependent rect. 1 9
99 144.96 atmosphere 995.0 270 > th dose independent rect. 13 4
107 145.08 atmosphere 1015.0 270 < th dose independent rect. 8 15
108 145.10 wind 9.0 270 < th dose independent rect. 17 20
113 145.12 humidity 50.0 270 > th dose independent rect. 19 17
125 145.37 humidity 50.0 270 > th dose independent rect. 17 20
126 145.44 precipitation 0.1 270 < th dose independent rect. 4 9
127 145.44 precipitation 0.1 270 < th dose dependent rect. 4 9
131 145.53 radiation 1.0 270 > th dose independent rect. 13 4
133 145.61 wind 3.0 90 > th dose independent rect. 14 7
147 145.77 precipitation 0.1 270 < th dose independent rect. 12 6
148 145.77 precipitation 0.1 270 < th dose dependent rect. 12 6
153 145.90 wind 1.0 10 > th dose independent rect. 14 7
155 145.97 temperature 10.0 270 > th dose independent rect. 4 9
156 145.97 atmosphere 995.0 270 > th dose independent rect. 4 9
157 145.97 atmosphere 1015.0 270 < th dose independent rect. 4 9
158 145.97 temperature 10.0 270 > th dose independent rect. 13 15
162 146.04 atmosphere 1015.0 270 < th dose independent rect. 19 17
171 146.28 radiation 40.0 270 < th dose independent rect. 18 19
188 146.59 temperature 15.0 270 > th dose independent rect. 1 16
192 146.64 wind 9.0 270 < th dose independent rect. 1 16
195 146.66 radiation 1.0 270 > th dose independent rect. 4 9
205 146.68 precipitation 0.1 270 < th dose independent rect. 17 8
206 146.68 precipitation 0.1 270 < th dose dependent rect. 17 8
209 146.71 temperature 30.0 270 < th dose independent rect. 18 18
216 146.75 temperature 15.0 10 > th dose independent rect. 21 17
222 146.81 precipitation 0.1 10 < th dose independent rect. 14 7
223 146.81 precipitation 0.1 10 < th dose dependent rect. 14 7
224 146.84 wind 9.0 270 < th dose independent rect. 13 15
227 146.87 temperature 10.0 10 > th dose independent rect. 14 7
229 146.87 atmosphere 1010.0 10 < th dose independent rect. 14 7
232 146.87 atmosphere 995.0 10 > th dose independent rect. 21 17
233 146.89 radiation 40.0 10 < th dose independent rect. 14 7
234 146.91 precipitation 0.1 90 < th dose independent rect. 21 17
235 146.91 precipitation 0.1 90 < th dose dependent rect. 21 17
239 146.99 precipitation 0.1 10 < th dose independent rect. 21 17
241 146.99 precipitation 0.1 10 < th dose dependent rect. 21 17
242 147.02 wind 9.0 10 < th dose independent rect. 14 7
256 147.18 wind 7.0 270 < th dose independent rect. 17 8
270 147.33 wind 1.0 270 > th dose independent rect. 8 15
279 147.38 temperature 10.0 270 > th dose dependent rect. 13 4
289 147.46 temperature 10.0 270 > th dose independent rect. 17 8
290 147.46 radiation 20.0 270 < th dose independent rect. 17 8
294 147.46 atmosphere 1015.0 270 < th dose independent rect. 1 16
298 147.51 humidity 90.0 270 < th dose independent rect. 12 6
318 147.60 radiation 40.0 270 < th dose dependent rect. 17 8
321 147.64 humidity 50.0 270 > th dose independent rect. 13 4
331 147.68 wind 9.0 270 < th dose independent rect. 4 9
335 147.71 atmosphere 995.0 270 > th dose independent rect. 13 16
336 147.72 humidity 50.0 270 > th dose independent rect. 17 8
350 147.81 temperature 10.0 1440 > th dose independent rect. 15 7
353 147.81 wind 1.0 270 > th dose independent rect. 5 8
355 147.81 temperature 10.0 1440 > th dose independent rect. 22 17
403 148.15 wind 9.0 10 < th dose independent rect. 21 17
431 148.46 humidity 50.0 270 > th dose independent rect. 5 8
438 148.48 temperature 10.0 270 > th dose dependent rect. 12 6
443 148.54 atmosphere 995.0 270 > th dose independent rect. 1 16
453 148.59 atmosphere 1015.0 10 < th dose independent rect. 21 17
456 148.62 radiation 40.0 270 < th dose independent rect. 14 3
510 148.96 wind 1.0 270 > th dose independent rect. 17 20
514 149.00 atmosphere 1015.0 90 < th dose independent rect. 21 17
596 149.47 atmosphere 995.0 270 > th dose independent rect. 8 15
598 149.48 atmosphere 995.0 10 > th dose independent rect. 14 7
599 149.48 temperature 10.0 10 > th dose dependent rect. 14 7
616 149.64 temperature 10.0 90 > th dose dependent rect. 14 7
648 149.76 atmosphere 1015.0 270 < th dose independent rect. 18 6
656 149.81 precipitation 0.1 270 < th dose independent rect. 1 16
657 149.81 precipitation 0.1 270 < th dose dependent rect. 1 16
682 149.92 temperature 15.0 10 > th dose independent rect. 10 15
717 150.04 wind 9.0 10 < th dose independent rect. 1 9
718 150.04 temperature 10.0 10 > th dose independent rect. 1 9
720 150.04 humidity 50.0 10 > th dose independent rect. 1 9
721 150.04 atmosphere 995.0 10 > th dose independent rect. 1 9
722 150.04 atmosphere 1015.0 10 < th dose independent rect. 1 9
732 150.07 atmosphere 995.0 270 > th dose independent rect. 18 6
754 150.15 temperature 30.0 270 < th dose independent rect. 18 6
759 150.17 atmosphere 995.0 270 > th dose independent rect. 17 8
784 150.31 atmosphere 1015.0 270 < th dose independent rect. 19 4
807 150.42 temperature 30.0 90 < th dose independent rect. 21 16
809 150.43 atmosphere 995.0 270 > th dose dependent rect. 13 4
840 150.57 wind 9.0 270 < th dose dependent rect. 23 9
862 150.65 wind 1.0 270 > th dose independent rect. 17 8
918 150.80 precipitation 0.1 10 < th dose independent rect. 10 15
922 150.80 precipitation 0.1 10 < th dose dependent rect. 10 15
929 150.82 precipitation 0.1 270 < th dose independent rect. 13 16
930 150.82 precipitation 0.1 270 < th dose dependent rect. 13 16
958 150.90 temperature 10.0 270 > th dose dependent rect. 18 6
962 150.93 temperature 10.0 90 > th dose independent rect. 1 8
964 150.93 humidity 50.0 90 > th dose independent rect. 1 8
965 150.93 atmosphere 995.0 90 > th dose independent rect. 1 8
968 150.93 atmosphere 1015.0 270 < th dose dependent rect. 23 8
980 150.96 wind 9.0 90 < th dose independent rect. 1 8