Os05g0210600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0210600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein prenyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 348.36 | 0.877 | 5.87 | -1.45 | 0.991 | -0.96 | 0.768 | 0.0944 | -0.338 | 22.6 | 62 | 1471 | -- | -- |
| 348.38 | 0.869 | 5.87 | -1.45 | 0.991 | -0.953 | 0.769 | -- | -0.341 | 22.6 | 62.05 | 1470 | -- | -- |
| 350.74 | 0.872 | 5.87 | -1.48 | 0.99 | -0.967 | -- | 0.0848 | -0.337 | 22.5 | 62.15 | 1466 | -- | -- |
| 350.75 | 0.872 | 5.87 | -1.48 | 0.987 | -0.967 | -- | -- | -0.339 | 22.5 | 62.15 | 1466 | -- | -- |
| 398.3 | 0.93 | 5.87 | -1.42 | -- | -1.18 | -- | 0.327 | -0.408 | -- | 66 | 1152 | -- | -- |
| 383.94 | 0.919 | 5.93 | -1.27 | 1.02 | -- | 0.931 | -- | -0.614 | 22.8 | -- | -- | -- | -- |
| 387.49 | 0.922 | 5.93 | -1.31 | 1.02 | -- | -- | -- | -0.616 | 22.7 | -- | -- | -- | -- |
| 396.77 | 0.928 | 5.87 | -1.51 | -- | -1.2 | -- | -- | -0.444 | -- | 65.53 | 1150 | -- | -- |
| 403.66 | 0.936 | 5.86 | -- | 1.01 | -1.21 | -- | -- | -0.414 | 22.1 | 62.2 | 8478 | -- | -- |
| 451.38 | 0.993 | 5.9 | -1.29 | -- | -- | -- | -- | -0.611 | -- | -- | -- | -- | -- |
| 432.6 | 0.973 | 5.9 | -- | 1.01 | -- | -- | -- | -0.47 | 22.6 | -- | -- | -- | -- |
| 444.38 | 0.982 | 5.87 | -- | -- | -1.6 | -- | -- | -0.461 | -- | 63.36 | 26690 | -- | -- |
| 495.19 | 1.04 | 5.87 | -- | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 347.99 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 2 | 348.60 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 22 |
| 6 | 348.78 | humidity | 70 | 1440 | < th | dose dependent | sin | 11 | NA |
| 17 | 349.78 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 20 | 349.88 | humidity | 60 | 1440 | < th | dose independent | rect. | 13 | 22 |
| 21 | 349.89 | humidity | 60 | 1440 | > th | dose independent | sin | 11 | NA |
| 22 | 349.91 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 19 |
| 25 | 350.08 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 19 |
| 29 | 350.10 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 34 | 350.12 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 47 | 350.20 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 49 | 350.21 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 63 | 350.23 | humidity | 60 | 1440 | > th | dose independent | no | NA | NA |
| 73 | 350.23 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 85 | 350.24 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 142 | 350.40 | humidity | 60 | 1440 | > th | dose independent | sin | 18 | NA |
| 146 | 350.49 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 148 | 350.55 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 15 |
| 160 | 350.58 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 163 | 350.60 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 193 | 350.83 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 219 | 350.94 | humidity | 60 | 1440 | < th | dose independent | no | NA | NA |
| 308 | 350.97 | humidity | 60 | 1440 | < th | dose independent | sin | 11 | NA |
| 336 | 351.23 | humidity | 60 | 1440 | < th | dose independent | sin | 19 | NA |
| 434 | 351.61 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 439 | 351.74 | humidity | 60 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 458 | 351.87 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 495 | 352.14 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 515 | 352.15 | humidity | 70 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 518 | 352.19 | humidity | 70 | 1440 | < th | dose dependent | no | NA | NA |
| 519 | 352.19 | humidity | 70 | 1440 | < th | dose dependent | rect. | 6 | 14 |
| 587 | 352.21 | humidity | 70 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 653 | 352.34 | humidity | 70 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 671 | 352.41 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 733 | 352.75 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 754 | 352.89 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 781 | 353.05 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 784 | 353.09 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 802 | 353.20 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 814 | 353.23 | radiation | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 849 | 353.61 | radiation | 40 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 882 | 353.82 | wind | 1 | 720 | < th | dose independent | rect. | 4 | 1 |
| 911 | 354.10 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 925 | 354.13 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 927 | 354.17 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 950 | 354.29 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 988 | 354.34 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 1 |