Os05g0208900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0208900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.83 | 0.497 | 8.41 | 0.318 | 1.35 | -0.851 | 0.0541 | -1.46 | -0.216 | 7.32 | 42.28 | 4602 | -- | -- |
| 115.24 | 0.5 | 8.41 | 0.292 | 1.36 | -0.882 | 0.205 | -- | -0.231 | 7.28 | 42.08 | 4603 | -- | -- |
| 111.84 | 0.493 | 8.41 | 0.319 | 1.35 | -0.851 | -- | -1.46 | -0.216 | 7.32 | 42.28 | 4602 | -- | -- |
| 114.99 | 0.499 | 8.41 | 0.255 | 1.35 | -0.858 | -- | -- | -0.226 | 7.24 | 41.88 | 4602 | -- | -- |
| 207.29 | 0.671 | 8.41 | 0.284 | -- | -0.848 | -- | -1.32 | -0.179 | -- | 42.23 | 4469 | -- | -- |
| 133.96 | 0.543 | 8.38 | 0.132 | 1.35 | -- | 0.0709 | -- | -0.122 | 7.45 | -- | -- | -- | -- |
| 133.97 | 0.542 | 8.38 | 0.133 | 1.35 | -- | -- | -- | -0.122 | 7.44 | -- | -- | -- | -- |
| 209.41 | 0.674 | 8.42 | 0.273 | -- | -0.971 | -- | -- | -0.199 | -- | 42.11 | 4482 | -- | -- |
| 115.25 | 0.5 | 8.41 | -- | 1.38 | -0.815 | -- | -- | -0.234 | 7.28 | 41.34 | 4602 | -- | -- |
| 231.28 | 0.711 | 8.41 | 0.154 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 134.44 | 0.542 | 8.38 | -- | 1.35 | -- | -- | -- | -0.137 | 7.44 | -- | -- | -- | -- |
| 210.03 | 0.675 | 8.44 | -- | -- | -0.924 | -- | -- | -0.24 | -- | 41.44 | 4482 | -- | -- |
| 231.91 | 0.711 | 8.41 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.39 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 3 | 109.60 | temperature | 30 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 109.79 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 6 | 109.83 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 20 | 109.85 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 22 | 109.85 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 21 |
| 23 | 109.86 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 72 | 109.93 | temperature | 30 | 14400 | > th | dose independent | sin | 4 | NA |
| 111 | 109.96 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 116 | 109.97 | temperature | 30 | 14400 | < th | dose independent | sin | 4 | NA |
| 198 | 110.04 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 200 | 110.04 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 209 | 110.06 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 218 | 110.06 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 258 | 110.09 | temperature | 30 | 14400 | > th | dose dependent | sin | 7 | NA |
| 287 | 110.12 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 328 | 110.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 336 | 110.15 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 428 | 110.15 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 435 | 110.16 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 763 | 110.41 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 859 | 110.55 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 974 | 110.57 | radiation | 30 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 991 | 110.59 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 994 | 110.61 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 23 |