Os05g0207900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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Os05g0207900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.63 | 0.167 | 12.5 | 0.726 | 0.165 | 0.436 | 0.26 | -0.171 | 0.387 | 22.5 | 62.03 | 1617 | -- | -- |
| 12.66 | 0.166 | 12.5 | 0.707 | 0.163 | 0.429 | 0.252 | -- | 0.385 | 22.6 | 63 | 1592 | -- | -- |
| 12.89 | 0.167 | 12.5 | 0.708 | 0.163 | 0.425 | -- | -0.11 | 0.386 | 23 | 63.02 | 1586 | -- | -- |
| 12.9 | 0.167 | 12.5 | 0.695 | 0.163 | 0.422 | -- | -- | 0.386 | 23.1 | 63.59 | 1571 | -- | -- |
| 14.52 | 0.177 | 12.5 | 0.718 | -- | 0.455 | -- | -0.169 | 0.392 | -- | 63.03 | 1594 | -- | -- |
| 16.27 | 0.189 | 12.6 | 0.704 | 0.186 | -- | 0.18 | -- | 0.348 | 23.5 | -- | -- | -- | -- |
| 16.4 | 0.19 | 12.6 | 0.697 | 0.185 | -- | -- | -- | 0.347 | 23.8 | -- | -- | -- | -- |
| 14.53 | 0.178 | 12.5 | 0.695 | -- | 0.471 | -- | -- | 0.398 | -- | 66 | 1590 | -- | -- |
| 25.07 | 0.233 | 12.5 | -- | 0.189 | 0.463 | -- | -- | 0.41 | 23.6 | 62.34 | 7441 | -- | -- |
| 18.56 | 0.201 | 12.6 | 0.702 | -- | -- | -- | -- | 0.349 | -- | -- | -- | -- | -- |
| 29.2 | 0.253 | 12.6 | -- | 0.194 | -- | -- | -- | 0.269 | 0.000242 | -- | -- | -- | -- |
| 23.29 | 0.225 | 12.5 | -- | -- | 0.626 | -- | -- | 0.433 | -- | 25.98 | 30408 | -- | -- |
| 31.57 | 0.262 | 12.6 | -- | -- | -- | -- | -- | 0.271 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.91 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 4 | 11.99 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 5 | 12.00 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 8 |
| 9 | 12.02 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 10 | 12.03 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 14 | 12.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 35 | 12.18 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 40 | 12.19 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 42 | 12.20 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 51 | 12.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 103 | 12.30 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 113 | 12.32 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 120 | 12.33 | humidity | 70 | 1440 | > th | dose dependent | sin | 23 | NA |
| 226 | 12.49 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 14 |
| 282 | 12.55 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 370 | 12.63 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 518 | 12.69 | humidity | 60 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 532 | 12.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 629 | 12.74 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 737 | 12.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 868 | 12.82 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 930 | 12.85 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 943 | 12.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 992 | 12.87 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |