BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0207900 Os05g0207900|AK068965
(991 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09730.1 | chr1:3148017-3154236 REVERSE LENGTH=964 402 e-112
AT4G33620.1 | chr4:16147692-16152853 FORWARD LENGTH=784 308 1e-83
AT1G10570.1 | chr1:3487639-3491102 FORWARD LENGTH=572 132 6e-31
AT1G60220.1 | chr1:22208332-22211910 FORWARD LENGTH=585 132 1e-30
AT4G15880.1 | chr4:9012769-9015797 FORWARD LENGTH=490 88 3e-17
AT3G06910.1 | chr3:2178905-2181188 REVERSE LENGTH=503 80 5e-15
AT4G00690.1 | chr4:281313-283129 FORWARD LENGTH=349 70 6e-12
AT3G48480.1 | chr3:17957326-17959062 REVERSE LENGTH=299 70 8e-12
>AT1G09730.1 | chr1:3148017-3154236 REVERSE LENGTH=964
Length = 963
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/422 (50%), Positives = 288/422 (68%), Gaps = 10/422 (2%)
Query: 127 EHIYNVLGEMVDKEGPVVLSPEYVMCGTTSHVEPRLTFSADGFKIEYWDSCENDEMAAQY 186
EH +N E +D V+++ EYV+ + FS +G KI+ + + + +
Sbjct: 259 EHCFND-EEKIDLSTAVIMTSEYVILKDMHCAASLVIFSCNGIKIKSFLANNEEVPFSCE 317
Query: 187 WKISDITCIDCKWAQSVGSVLITLHVGSGTETGNSSHDRIQFCLIDSQWPRKQQNIWHLA 246
+ + DI I W Q+VG +++ + V E + + ++ + + WP KQQ I L
Sbjct: 318 FGVEDIVSIQYNWYQNVGLIILRIRVLLKDENCHEDMEELKIAVKEHNWPNKQQKINSLH 377
Query: 247 SRYQEIWNNIPSGDFASENWNIEPSLFFPKQYFSDTEE-FEDVIYPKGDHDAVSISKRDV 305
+Y +WN D +N+ K+YF +E FEDV+YPKGD DAVSI KRDV
Sbjct: 378 VKYPAVWNTDLEDDVEVSGYNLNQQ----KRYFPSFDEPFEDVVYPKGDPDAVSICKRDV 433
Query: 306 ELLLPETFVNDTIIDFYVKHLSTRIEPAEKHRYHFFNSFFFRKLADLDKDQGRAPEGRAA 365
ELL PETFVNDTIIDFY+ +L +I+ EKHR+HFFNSFFFRKLADLDKD +G+AA
Sbjct: 434 ELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFFRKLADLDKDPSSIADGKAA 493
Query: 366 FLRVRKWTRKINIFTKEFLFIPVNFNLHWSLIVICYPGEVETFKDGDTNISAKIPCILHM 425
FLRVRKWTRK+++F K+++F+PVN+NLHWSLIVIC+PGEV D D + S K+PCILHM
Sbjct: 494 FLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTDLDLDDSKKVPCILHM 553
Query: 426 DSLKGSHSGLKDIIQSYLWEEWKERHPESASDCSDKFLNLRFISLELPQQDNSFDCGLFL 485
DS+KGSH+GLK+++Q+YL EEWKERH E++ D S +F+NLRF+SLELPQQ+NSFDCGLFL
Sbjct: 554 DSIKGSHAGLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFVSLELPQQENSFDCGLFL 613
Query: 486 LHYVELFLMDTPRSFNPLKIDSFANYLSDDWFPPAEASLKRSL----IRKLIHKLLKEPS 541
LHY+ELFL + P +F+P KI + +N+L +WFPPAEASLKR+L I +L+ +E S
Sbjct: 614 LHYLELFLAEAPLNFSPFKIYNASNFLYLNWFPPAEASLKRTLIQKLIFELLENRSREVS 673
Query: 542 QD 543
+
Sbjct: 674 NE 675
>AT4G33620.1 | chr4:16147692-16152853 FORWARD LENGTH=784
Length = 783
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 252/412 (61%), Gaps = 24/412 (5%)
Query: 143 VVLSPEYVMCGTTSHVEPRLTFSADGFKIEYWDSCENDEMAAQYWKISDITCIDCKWAQS 202
V++ P+ ++ G +LTFS + +E + W I DI I+ +W
Sbjct: 148 VLIIPDVIIYGDIYCTNSKLTFSRNCMNVESSSVNATKGTFSCQWTIEDIIKIESQWCLE 207
Query: 203 VGSVLITLHVGSGTETGN------SSHDRIQFCLIDSQWPRKQQNIWHLASRYQEIWNNI 256
V + + + + S G S D ++F + D +W ++ + I L SRY+ IW +
Sbjct: 208 VETAFVNVLLKSRKPEGVDIAKDISGIDLLKFSVYDPKWSKEVETIRSLDSRYKNIWFDT 267
Query: 257 --PSGDFASENWNIEPSLFFPKQYFSDTEEFEDVIYPKGDHDAVSISKRDVELLLPETFV 314
S + A ++ SL +D+ FED++YP+G+ DAV + K+D+ELL P F+
Sbjct: 268 ITESEEIAFSGHDLGTSL----TNLADS--FEDLVYPQGEPDAVVVRKQDIELLKPRRFI 321
Query: 315 NDTIIDFYVKHLSTRIEPAEKHRYHFFNSFFFRKLADLDKDQGRAPEGRAAFLRVRKWTR 374
NDTIIDFY+K+L RI P E+ R+HFFN FFFRKLA+LDK GR A+ RV+KWT+
Sbjct: 322 NDTIIDFYIKYLKNRISPKERGRFHFFNCFFFRKLANLDKGTPSTCGGREAYQRVQKWTK 381
Query: 375 KINIFTKEFLFIPVNFNLHWSLIVICYPGEV-------ETFKDGDTNISAKIPCILHMDS 427
+++F K+++FIP+N + HWSL++IC+PGE+ +F D N ++PCILH+DS
Sbjct: 382 NVDLFEKDYIFIPINCSFHWSLVIICHPGELVPSHVNFHSFDDEVEN-PQRVPCILHLDS 440
Query: 428 LKGSH-SGLKDIIQSYLWEEWKERHPESASDCSDKFLNLRFISLELPQQDNSFDCGLFLL 486
+KGSH GL +I SYL EEWK RH + +D S + N++ ISLELPQQ+NSFDCGLFLL
Sbjct: 441 IKGSHKGGLINIFPSYLREEWKARHENTTND-SSRAPNMQSISLELPQQENSFDCGLFLL 499
Query: 487 HYVELFLMDTPRSFNPLKIDSFANYLSDDWFPPAEASLKRSLIRKLIHKLLK 538
HY++LF+ P FNP I AN+L+ +WFP EASLKR I +L++ L K
Sbjct: 500 HYLDLFVAQAPAKFNPSLISRSANFLTRNWFPAKEASLKRRNILELLYNLHK 551
>AT1G10570.1 | chr1:3487639-3491102 FORWARD LENGTH=572
Length = 571
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 148/274 (54%), Gaps = 36/274 (13%)
Query: 286 EDVIYPKGDH----DAVSISKRDVELLLPETFVNDTIIDFYVKHLSTRIEPAEKHRY--H 339
ED+ YP D D V +S +D++ L P ++ +I+FY++++ + A+K H
Sbjct: 315 EDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCH 374
Query: 340 FFNSFFFRKLADLDKDQGRAPEGRAAFLRVRKWTRKINIFTKEFLFIPVNFNLHWSLIVI 399
FFN+FF++KL + +G + A F++ R+W + ++F K ++FIP++ +LHWSL++I
Sbjct: 375 FFNTFFYKKLTEAVSYKGN--DRDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSLVII 432
Query: 400 CYPGEVETFKDGDTNISAKIPCILHMDSLKGSHSG--LKDIIQSYLWEEWKERH------ 451
C P K+ ++ ++ I+H+DSL G H + + ++ +L EEW +
Sbjct: 433 CIPD-----KEDESGLT-----IIHLDSL-GLHPRNLIFNNVKRFLREEWNYLNQDAPLD 481
Query: 452 -PESASDCSDKFLNLRFISLELPQQDNSFDCGLFLLHYVELFLMDTPR--SFNPLKIDSF 508
P SA D + +++PQQ N FDCGLFLL ++ F+ + P+ + LK+
Sbjct: 482 LPISAKVWRDLPNMINEAEVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKM--- 538
Query: 509 ANYLSDDWFPPAEASLKRSLIRKLIHKLLKEPSQ 542
+ WF P EAS R I ++ L ++ +Q
Sbjct: 539 ---IHKKWFKPEEASALRIKIWNILVDLFRKGNQ 569
>AT1G60220.1 | chr1:22208332-22211910 FORWARD LENGTH=585
Length = 584
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 149/266 (56%), Gaps = 30/266 (11%)
Query: 286 EDVIYP-KGDHDAVSISKRDVELLLPETFVNDTIIDFYVKHLSTRIEPAEKHRY--HFFN 342
ED+ YP + D V + +D+E L P ++ +++FY++ L +I + + HFFN
Sbjct: 330 EDICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFN 389
Query: 343 SFFFRKLADLDKDQGRAPEGRAAFLRVRKWTRKINIFTKEFLFIPVNFNLHWSLIVICYP 402
++F++KL+D +G + A F+R R+W + I++F K ++FIP++ +LHWSL+++C P
Sbjct: 390 TYFYKKLSDAVTYKGNDKD--AFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIP 447
Query: 403 GEVETFKDGDTNISAKIPCILHMDSLKGSHS--GLKDIIQSYLWEEWKERHPESAS---D 457
K ++ ++ ILH+DSL G HS + + ++ +L +EW + + S
Sbjct: 448 D-----KKDESGLT-----ILHLDSL-GLHSRKSIVENVKRFLKDEWNYLNQDDYSLDLP 496
Query: 458 CSDK-FLNL-RFIS---LELPQQDNSFDCGLFLLHYVELFLMDTPRSFNPLKIDSFANYL 512
S+K + NL R IS +++PQQ N FDCG F+L +++ F+ + P+ + F
Sbjct: 497 ISEKVWKNLPRRISEAVVQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMF---- 552
Query: 513 SDDWFPPAEASLKRSLIRKLIHKLLK 538
WF P EAS R IR + +L +
Sbjct: 553 DKKWFRPDEASALRIKIRNTLIELFR 578
>AT4G15880.1 | chr4:9012769-9015797 FORWARD LENGTH=490
Length = 489
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 35/201 (17%)
Query: 298 VSISKRDVELLLPETFVNDTIIDFYVKHLSTR--IEPAEKHRYHFFNSFFFRKLADLDKD 355
+ I+ ++ L P ++ND +I+ Y++ L R EP + + H+FN+FF++KL D
Sbjct: 288 IDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKLVS---D 344
Query: 356 QGRAPEGRAAFLRVRKWT--RKIN--IFTKEFLFIPVNFNLHWSLIVICYPGEVETFKDG 411
G F VR+WT RK+ + + +F+P++ +HW+L VI
Sbjct: 345 SG------YNFKAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTLAVI------------ 386
Query: 412 DTNISAKIPCILHMDSLKGSHSGLKDIIQSYLWEEWKERHPESASDCSDKFLNLRFISLE 471
N +K+ L++DSL G + + + Y+ +E E+ S ++ F+ +
Sbjct: 387 -NNRESKL---LYLDSLNGVDPMILNALAKYMGDEANEK---SGKKIDANSWDMEFVE-D 438
Query: 472 LPQQDNSFDCGLFLLHYVELF 492
LPQQ N +DCG+F+L Y++ F
Sbjct: 439 LPQQKNGYDCGMFMLKYIDFF 459
>AT3G06910.1 | chr3:2178905-2181188 REVERSE LENGTH=503
Length = 502
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 34/201 (16%)
Query: 298 VSISKRDVELLLPETFVNDTIIDFYVKHLSTR--IEPAEKHRYHFFNSFFFRKLADLDKD 355
+ I+ + + L P ++ND +I+ Y+ L R EP + + HFFN+FFF KL +
Sbjct: 300 IDITGKILRCLKPGKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATG 359
Query: 356 QGRAPEGRAAFLRVRKWT--RKINIFTKEF--LFIPVNFNLHWSLIVICYPGEVETFKDG 411
VR+WT +++ K+ +FIP++ N+HW+L VI
Sbjct: 360 YNYGA--------VRRWTSMKRLGYHLKDCDKIFIPIHMNIHWTLAVI------------ 399
Query: 412 DTNISAKIPCILHMDSLKGSHSGLKDIIQSYLWEEWKERHPESASDCSDKFLNLRFISLE 471
NI K ++DS KG + D + Y +E +++ S D F+ +
Sbjct: 400 --NI--KDQKFQYLDSFKGREPKILDALARYFVDEVRDK---SEVDLDVSRWRQEFVQ-D 451
Query: 472 LPQQDNSFDCGLFLLHYVELF 492
LP Q N FDCG+F++ Y++ +
Sbjct: 452 LPMQRNGFDCGMFMVKYIDFY 472
>AT4G00690.1 | chr4:281313-283129 FORWARD LENGTH=349
Length = 348
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 36/202 (17%)
Query: 298 VSISKRDVELLLPETFVNDTIIDFYVKHLSTR--IEPAEKHRYHFFNSFFFRKLADLDKD 355
+ IS ++ L P ++ND + + Y++ L R +P + + HFFN+FF+ KL
Sbjct: 139 IDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKLVS---- 194
Query: 356 QGRAPEGRAAFLRVRKWTRK----INIFTKEFLFIPVNFNLHWSLIVICYPGEVETFKDG 411
G +A V +WT K ++ + +F+P++ ++HW+L VI
Sbjct: 195 -GSGYNYKA----VSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVI------------ 237
Query: 412 DTNISAKIPCILHMDSL-KGSHSGLKDIIQSYLWEEWKERHPESASDCSDKFLNLRFISL 470
N K +++DSL G + + + YL +E K++ ++ S + ++
Sbjct: 238 -NNRERKF---VYLDSLFTGVGHTILNAMAKYLVDEVKQKSQKNIDVSS---WGMEYVE- 289
Query: 471 ELPQQDNSFDCGLFLLHYVELF 492
E PQQ N +DCG+F+L Y++ +
Sbjct: 290 ERPQQQNGYDCGMFMLKYIDFY 311
>AT3G48480.1 | chr3:17957326-17959062 REVERSE LENGTH=299
Length = 298
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
Query: 377 NIFTKEFLFIPVNFNLHWSLIVICYPGEVETFKDGDTNISAKIPCILHMDSLKGSHSG-- 434
IF+K+++F+P+ + HW+L++ C GE D D++ + C+L +DSL+ + S
Sbjct: 152 QIFSKKYVFLPIVYWSHWTLLIFCNFGE-----DLDSDKT----CMLFLDSLQTTDSSQR 202
Query: 435 LKDIIQSYLWEEWKERHPESASDCSDKFLNLRFISLELPQQDNSFDCGLFLLHYVELFLM 494
L+ I+ ++ + ++ S D+ + F +PQQ N +CG F+L+Y+ F+
Sbjct: 203 LEPDIRKFVLDIYRAEGRTEDSSLVDE---IPFYVPMVPQQTNDVECGSFVLYYIHRFIE 259
Query: 495 DTPRSFNPLKIDSFANYLSDDWF 517
D P +FN ++ +L +DWF
Sbjct: 260 DAPENFN---VEDMPYFLKEDWF 279
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.130 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,393,437
Number of extensions: 1071571
Number of successful extensions: 2507
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2488
Number of HSP's successfully gapped: 8
Length of query: 991
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 883
Effective length of database: 8,145,641
Effective search space: 7192601003
Effective search space used: 7192601003
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 117 (49.7 bits)