Os05g0197300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os05g0197300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.14 | 0.624 | 7.23 | 0.771 | 1.23 | 0.376 | -1.09 | -3.53 | 0.184 | 8.46 | 3 | 1314 | -- | -- |
| 186.64 | 0.636 | 7.18 | 0.661 | 1.23 | 0.546 | -1.2 | -- | 0.192 | 8.54 | 3.998 | 3949 | -- | -- |
| 177.29 | 0.62 | 7.23 | 0.733 | 1.17 | 0.436 | -- | -3.51 | 0.185 | 8.13 | 2.986 | 1062 | -- | -- |
| 190.36 | 0.643 | 7.13 | 0.587 | 1.22 | 0.688 | -- | -- | 0.368 | 8.68 | 2.178 | 3089 | -- | -- |
| 223.17 | 0.696 | 7.26 | 0.534 | -- | 1.13 | -- | -3.34 | 0.207 | -- | 2.982 | 640 | -- | -- |
| 189.15 | 0.645 | 7.18 | 0.77 | 1.27 | -- | -1.38 | -- | 0.179 | 8.68 | -- | -- | -- | -- |
| 195.2 | 0.654 | 7.18 | 0.722 | 1.28 | -- | -- | -- | 0.177 | 8.5 | -- | -- | -- | -- |
| 241.44 | 0.724 | 7.24 | 0.414 | -- | 1.16 | -- | -- | 0.194 | -- | 3.3 | 603 | -- | -- |
| 198.06 | 0.655 | 7.13 | -- | 1.21 | 0.97 | -- | -- | 0.375 | 8.65 | 1.736 | 2911 | -- | -- |
| 286.47 | 0.791 | 7.21 | 0.728 | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
| 208.95 | 0.676 | 7.19 | -- | 1.28 | -- | -- | -- | 0.0968 | 8.45 | -- | -- | -- | -- |
| 245.24 | 0.729 | 7.21 | -- | -- | 1.22 | -- | -- | 0.192 | -- | 3.2 | 590 | -- | -- |
| 300.44 | 0.809 | 7.23 | -- | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.03 | wind | 3 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 171.03 | wind | 1 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 3 | 171.57 | wind | 5 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 6 | 172.17 | wind | 3 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 8 | 173.22 | wind | 3 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 10 | 173.49 | wind | 3 | 1440 | > th | dose independent | rect. | 3 | 12 |
| 13 | 173.72 | wind | 3 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 15 | 173.76 | wind | 3 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 18 | 173.82 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 1 |
| 20 | 173.82 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 34 | 174.18 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 23 | 10 |
| 38 | 174.20 | wind | 3 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 41 | 174.23 | wind | 3 | 1440 | < th | dose independent | sin | 4 | NA |
| 47 | 174.26 | wind | 3 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 48 | 174.27 | wind | 1 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 51 | 174.28 | wind | 5 | 1440 | < th | dose dependent | rect. | 3 | 12 |
| 64 | 174.39 | wind | 7 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 74 | 174.47 | wind | 3 | 1440 | > th | dose independent | sin | 4 | NA |
| 94 | 174.58 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 19 | 14 |
| 109 | 174.69 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 20 | 11 |
| 134 | 174.88 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 20 | 4 |
| 151 | 174.96 | wind | 5 | 1440 | < th | dose dependent | sin | 4 | NA |
| 216 | 175.28 | wind | 3 | 1440 | < th | dose dependent | rect. | 4 | 20 |
| 231 | 175.35 | wind | 5 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 238 | 175.38 | wind | 5 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 279 | 175.56 | wind | 3 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 282 | 175.58 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 307 | 175.65 | radiation | 1 | 720 | < th | dose independent | rect. | 11 | 4 |
| 308 | 175.65 | radiation | 1 | 720 | < th | dose dependent | rect. | 11 | 4 |
| 312 | 175.67 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 4 |
| 319 | 175.70 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 16 | 17 |
| 333 | 175.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 344 | 175.79 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 354 | 175.82 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 456 | 176.20 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 9 |
| 461 | 176.22 | wind | 7 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 475 | 176.27 | wind | 7 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 516 | 176.37 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 525 | 176.40 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 526 | 176.40 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 533 | 176.43 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 544 | 176.46 | radiation | 20 | 270 | < th | dose independent | sin | 8 | NA |
| 554 | 176.48 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 12 |
| 605 | 176.57 | wind | 1 | 1440 | > th | dose dependent | sin | 5 | NA |
| 616 | 176.59 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 700 | 176.74 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 735 | 176.78 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 8 |
| 745 | 176.79 | wind | 5 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 771 | 176.84 | temperature | 20 | 30 | > th | dose independent | rect. | 10 | 16 |
| 773 | 176.84 | wind | 5 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 776 | 176.85 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 832 | 176.93 | humidity | 70 | 270 | > th | dose independent | rect. | 17 | 11 |
| 854 | 176.95 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 911 | 177.02 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 7 |
| 940 | 177.05 | temperature | 20 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 942 | 177.06 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 960 | 177.08 | wind | 7 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 994 | 177.11 | atmosphere | 1000 | 14400 | > th | dose dependent | sin | 7 | NA |