BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0197300 Os05g0197300|AK106389
(556 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26190.1 | chr2:11147901-11150082 REVERSE LENGTH=533 408 e-114
AT3G13600.1 | chr3:4445102-4447383 FORWARD LENGTH=606 403 e-112
AT5G57010.1 | chr5:23068207-23070203 FORWARD LENGTH=496 397 e-111
AT4G33050.2 | chr4:15944604-15946736 REVERSE LENGTH=527 393 e-109
AT3G58480.1 | chr3:21629341-21631853 FORWARD LENGTH=576 389 e-108
AT3G52870.1 | chr3:19593365-19595686 REVERSE LENGTH=457 334 9e-92
>AT2G26190.1 | chr2:11147901-11150082 REVERSE LENGTH=533
Length = 532
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/369 (55%), Positives = 255/369 (69%), Gaps = 12/369 (3%)
Query: 16 FSPRSKHIAMVNKISPWDQQEKMALRSNGALVKSLSFKEWEGGEQTKTNSVNHKNR---- 71
FS + K + ++ + + + + +SLSF WE + +T +N ++
Sbjct: 36 FSLKLKEGGLTSRTNSFKSENPQEKSPKTGMERSLSFNSWEIVTEVETEPMNKEDEEIVE 95
Query: 72 PSLINVVVDNRRNSDIFMAESSP--------IVSSSPKCELDAAAVKVQKVYKSYRTRRN 123
P+ N RN + S P ELDAAA +QKVYKSYRTRRN
Sbjct: 96 PTKPARNSLNGRNCERIQITKPTITPPTPFVFFSPRPVTELDAAATTLQKVYKSYRTRRN 155
Query: 124 LADCAVVVEELWWKALDFASLKHSSISFFNGEKPETXXXXXXXXXXXXXKVGKGLSKNGK 183
LADCAVVVEELWWK LD A+L SS++FF EK ET KVGKGLSK+ K
Sbjct: 156 LADCAVVVEELWWKTLDAAALNLSSVAFFEEEKHETAVSKWARARTRAAKVGKGLSKDEK 215
Query: 184 AQKLALQHWLEAIDPRHRYGHNLHIYYGVWSRSESTEPFFYWLDIGEGKEVNLDRCPRNK 243
AQKLALQHWLEAIDPRHRYGHNLH YY VWS S S +PFFYWLDIG+GK+VNL+ PR+
Sbjct: 216 AQKLALQHWLEAIDPRHRYGHNLHFYYDVWSASMSAQPFFYWLDIGDGKDVNLEHHPRSV 275
Query: 244 LQSQCVKYLGPKERQEYEVVVESGRLVYKQSGVFVHTSDDSKWIFVLSTTKALYVGQKKK 303
LQ QC+KYLGP ER+ YEV+VE G+L+ KQS +++++DSK IFVLSTT+ LYVGQKKK
Sbjct: 276 LQKQCIKYLGPLEREAYEVIVEDGKLMNKQSMTLINSTEDSKSIFVLSTTRTLYVGQKKK 335
Query: 304 GSFQHSSFLAGGAITSAGRLVVKDGILKAIWPYSGHYLPTEENFREFISYLQENGVDLAD 363
G FQHSSFL+GGA T+AGRLV ++GIL+AIWPYSGHYLPTE+NF EFIS+L+EN VD+ +
Sbjct: 336 GRFQHSSFLSGGATTAAGRLVAREGILEAIWPYSGHYLPTEDNFNEFISFLEENNVDMTN 395
Query: 364 VKRCPMDKD 372
VKRC ++++
Sbjct: 396 VKRCSVNEE 404
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 15/86 (17%)
Query: 467 LPCRWSTGTGPRIRCVRDYPQDLQSRALEHVNLSPRLAAAGVAPATRKRDPVPSP----- 521
L C+W++G GPRI CVRDYP +LQS+A E V+LSPR ++P + + PSP
Sbjct: 453 LSCKWNSGVGPRIGCVRDYPMELQSQAFEQVSLSPR-----ISPGSTR---FPSPYGPIP 504
Query: 522 --RPSPGMILSPRLASVGFRPPVVAL 545
RPSP + +SPRLA +G P V +
Sbjct: 505 SPRPSPRVRVSPRLAYMGIPSPRVQV 530
>AT3G13600.1 | chr3:4445102-4447383 FORWARD LENGTH=606
Length = 605
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/272 (69%), Positives = 219/272 (80%), Gaps = 5/272 (1%)
Query: 107 AAVKVQKVYKSYRTRRNLADCAVVVEELWWKALDFASLKHSSISFFNGEKPETXXXXXXX 166
AA+K+QKVYKS+RTRR LADCAV+VE+ WWK LDFA LK SSISFF+ EK ET
Sbjct: 108 AAIKLQKVYKSFRTRRKLADCAVLVEQSWWKLLDFAELKRSSISFFDIEKHETAISRWSR 167
Query: 167 XXXXXXKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHIYYGVWSRSESTEPFFYWL 226
KVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLH YY W +S EPFFYWL
Sbjct: 168 ARTRAAKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHFYYNKWLHCQSREPFFYWL 227
Query: 227 DIGEGKEVNL-DRCPRNKLQSQCVKYLGPKERQEYEVVVESGRLVYKQSGVFVHTSD--- 282
DIGEGKEVNL ++CPR KLQ QC+KYLGP ER+ YEVVVE G+ YK SG + TSD
Sbjct: 228 DIGEGKEVNLVEKCPRLKLQQQCIKYLGPMERKAYEVVVEDGKFFYKHSGEILQTSDMED 287
Query: 283 -DSKWIFVLSTTKALYVGQKKKGSFQHSSFLAGGAITSAGRLVVKDGILKAIWPYSGHYL 341
+SKWIFVLST+K LYVG+KKKG+FQHSSFLAGGA +AGRLVV++G+LKA+WP+SGHY
Sbjct: 288 SESKWIFVLSTSKVLYVGKKKKGTFQHSSFLAGGATVAAGRLVVENGVLKAVWPHSGHYQ 347
Query: 342 PTEENFREFISYLQENGVDLADVKRCPMDKDD 373
PTEENF +F+S+L+EN VD+ DVK P D+D+
Sbjct: 348 PTEENFMDFLSFLRENDVDITDVKMSPTDEDE 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 466 HLPCRWSTGTGPRIRCVRDYPQDLQSRALEHVNLSPRLAAAG---VAPATRKRDPVPSP 521
L C+W+TG GPRI CVRDYP +LQ +ALE VNLSPR A+ + +++ + P SP
Sbjct: 531 QLSCKWTTGAGPRIGCVRDYPSELQFQALEQVNLSPRSASVSRLCFSSSSQTQTPQMSP 589
>AT5G57010.1 | chr5:23068207-23070203 FORWARD LENGTH=496
Length = 495
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/337 (59%), Positives = 243/337 (72%), Gaps = 19/337 (5%)
Query: 43 NGALVKSLSFK-----EWEGGEQTKTNSVNHKNRPSLINVVVDNRRN-SDIFMAESSPIV 96
N L +SLSF E GGE+ + K R NR N + + + +P
Sbjct: 73 NMILDRSLSFTSLVQVENRGGEEEDERGSSPKRR---------NRGNLTALSLPAPTPFW 123
Query: 97 SSSPKCELDAAAVKVQKVYKSYRTRRNLADCAVVVEELWWKALDFASLKHSSISFFNGEK 156
S P ELDAAAV +QKVYKSYRTRRNLADCAVVVEELWWK L+ A L+ + + +K
Sbjct: 124 SPRPSTELDAAAVTLQKVYKSYRTRRNLADCAVVVEELWWKELELAKLEPNKTN----DK 179
Query: 157 PETXXXXXXXXXXXXXKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHIYYGVWSRS 216
PE+ KVGKGL K+ KAQKLAL+HWLEAIDPRHRYGHNLH+YY VWS S
Sbjct: 180 PESAVSRWARAGTKAAKVGKGLLKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYDVWSES 239
Query: 217 ESTEPFFYWLDIGEGKEVNLDRCPRNKLQSQCVKYLGPKERQEYEVVVESGRLVYKQSGV 276
EST+PFF+WLDIG+GKEVNL++C R LQ QC+ YLGPKERQ YEVVVE G+LV +Q+
Sbjct: 240 ESTQPFFFWLDIGDGKEVNLNKCSRTLLQRQCITYLGPKERQAYEVVVEDGKLVSRQTKS 299
Query: 277 FVHTSDDSKWIFVLSTTKALYVGQKKKGSFQHSSFLAGGAITSAGRLVVKDGILKAIWPY 336
V T++ +KWIFVLSTT+ LY+GQK+KG FQHSSFL+G AIT+AGR+V DG++KA+WPY
Sbjct: 300 LVETTEGTKWIFVLSTTRKLYIGQKQKGRFQHSSFLSGAAITAAGRIVSHDGVVKAVWPY 359
Query: 337 SGHYLPTEENFREFISYLQENGVDLADVKRCPMDKDD 373
SGHYLPTEENFREFI +L+EN V+L +VK +D DD
Sbjct: 360 SGHYLPTEENFREFICFLRENHVNLTNVKMNAIDDDD 396
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 464 ENHLPCRWSTGTGPRIRCVRDYPQDLQSRALEHVNLSPRLAAAGVAPATRKRDPVPSPRP 523
+ C+WSTG GPRI CVRDYP DLQ+RALE VNLSPR+ + P+PSPRP
Sbjct: 420 QKRFSCKWSTGNGPRIGCVRDYPMDLQTRALEQVNLSPRVVNGTMGLF----GPIPSPRP 475
Query: 524 SPGMILSPRLASVGFRPP 541
SP + +SPRL+ +G P
Sbjct: 476 SPKIRVSPRLSCMGLPSP 493
>AT4G33050.2 | chr4:15944604-15946736 REVERSE LENGTH=527
Length = 526
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/374 (54%), Positives = 252/374 (67%), Gaps = 46/374 (12%)
Query: 45 ALVKSLSFKEWEGGEQTKTNS-----VNHKNRPSLINVVVDNR---RNSDIFMAESSPIV 96
+ +SLSF WE ++TKT+S K+ P+ +N R + + E
Sbjct: 39 TMERSLSFNSWEVPKETKTDSDFEVLETKKSTPNTLNGRNCERIQIKKPTVTPPEPFVFF 98
Query: 97 SSSPKCELDAAAVKVQKVYKSYRTRRNLADCAVVVEELWWKALDFASLKHSSISFFNGEK 156
S P ELDAAA +QKVYKSYRTRRNLADCAVVVEELWW+ L+ A+L SS+SFF EK
Sbjct: 99 SPRPVTELDAAATTLQKVYKSYRTRRNLADCAVVVEELWWRTLEGAALDLSSVSFFGEEK 158
Query: 157 PETXXXXXXXXXXXXXKVGKGLSKNGKAQKLALQHWLEA--------------------- 195
ET KVGKGLSK+ KAQKLALQHWLEA
Sbjct: 159 HETAVSKWARARKRAAKVGKGLSKDEKAQKLALQHWLEAVSPHNLNIFVTSYQRQVPYLT 218
Query: 196 -----------------IDPRHRYGHNLHIYYGVWSRSESTEPFFYWLDIGEGKEVNLDR 238
IDPRHRYGHNLH YY VWS S+ST+PFFYWLDIG+GK+VNL++
Sbjct: 219 SKAIIEYTLMIHLLKLQIDPRHRYGHNLHFYYDVWSASKSTQPFFYWLDIGDGKDVNLEK 278
Query: 239 CPRNKLQSQCVKYLGPKERQEYEVVVESGRLVYKQSGVFVHTSDDSKWIFVLSTTKALYV 298
PR+ LQ QC++YLGP ER+ YEV+VE GRL+YKQ +++++++K IFVLSTT+ LYV
Sbjct: 279 HPRSVLQKQCIRYLGPMEREAYEVIVEDGRLMYKQGMTLINSTEEAKSIFVLSTTRNLYV 338
Query: 299 GQKKKGSFQHSSFLAGGAITSAGRLVVKDGILKAIWPYSGHYLPTEENFREFISYLQENG 358
G KKKG FQHSSFL+GGA T+AGRLV +DGIL+AIWPYSGHYLPTE+NF+EFIS+L+E+
Sbjct: 339 GIKKKGLFQHSSFLSGGATTAAGRLVARDGILEAIWPYSGHYLPTEDNFKEFISFLEEHN 398
Query: 359 VDLADVKRCPMDKD 372
VDL +VKRC ++++
Sbjct: 399 VDLTNVKRCSVNEE 412
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
Query: 467 LPCRWSTGTGPRIRCVRDYPQDLQSRALEHVNLSPRLAAAGVAPATRKRDPVPSPRPSPG 526
L C+W++G GPRI CVRDYP +LQ++ALE V+LSPR++ A P+PSPRPSP
Sbjct: 453 LSCKWTSGYGPRIGCVRDYPMELQAQALEQVSLSPRVSPAN------SYGPIPSPRPSPK 506
Query: 527 MILSPRLASVGFRPP 541
+ +SPRLA +G P
Sbjct: 507 VRVSPRLAYMGIPSP 521
>AT3G58480.1 | chr3:21629341-21631853 FORWARD LENGTH=576
Length = 575
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/277 (65%), Positives = 219/277 (79%), Gaps = 3/277 (1%)
Query: 107 AAVKVQKVYKSYRTRRNLADCAVVVEELWWKALDFASLKHSSISFFNGEKPETXXXXXXX 166
AA+K+QKVY+S+RTRR LADCAVVVE+ WWK LDFA LK SSISFF EK ET
Sbjct: 98 AALKLQKVYRSFRTRRRLADCAVVVEQRWWKVLDFAELKRSSISFFEIEKQETAVSRWSR 157
Query: 167 XXXXXXKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHIYYGVWSRSESTEPFFYWL 226
KVGKGLSK+ KA+KLALQHWLEAIDPRHRYGHNL YY W +S +PFFYWL
Sbjct: 158 ARTRAAKVGKGLSKDEKARKLALQHWLEAIDPRHRYGHNLQFYYHAWLHCDSKQPFFYWL 217
Query: 227 DIGEGKEVNLDRCPRNKLQSQCVKYLGPKERQEYEVVVESGRLVYKQSGVFVHTSD---D 283
DIG+GKE+N +RCPR+KL Q +KYLGP ER+ YEV++E G+L+YKQSG+ + T + D
Sbjct: 218 DIGQGKELNHERCPRSKLYQQSIKYLGPTEREAYEVIIEDGKLMYKQSGIVLDTKEGPPD 277
Query: 284 SKWIFVLSTTKALYVGQKKKGSFQHSSFLAGGAITSAGRLVVKDGILKAIWPYSGHYLPT 343
+KWIFVLS +K LYVG KKKG+FQHSSFLAGGA SAGR+VV DG+LKA+WP+SGHYLPT
Sbjct: 278 AKWIFVLSVSKILYVGMKKKGNFQHSSFLAGGATLSAGRIVVDDGVLKAVWPHSGHYLPT 337
Query: 344 EENFREFISYLQENGVDLADVKRCPMDKDDEYPLLTK 380
EENF+ F+S+L+EN VDLA+VK+ P ++D E P K
Sbjct: 338 EENFQAFMSFLRENNVDLANVKKNPDEEDGEAPAKVK 374
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 467 LPCRWSTGTGPRIRCVRDYPQDLQSRALEHVNLSPRLAA 505
L RWSTG GPRI C+RDYP +LQ R LE +LSPR ++
Sbjct: 507 LHSRWSTGAGPRISCMRDYPSELQFRVLEQAHLSPRASS 545
>AT3G52870.1 | chr3:19593365-19595686 REVERSE LENGTH=457
Length = 456
Score = 334 bits (856), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 203/271 (74%), Gaps = 3/271 (1%)
Query: 107 AAVKVQKVYKSYRTRRNLADCAVVVEELWWKALDFASLKHSSISFFNGEKPETXXXXXXX 166
AAVKVQKVY+SYRTRR LAD VV EELWW+A+D+A L HS+ISFF+ +PET
Sbjct: 49 AAVKVQKVYRSYRTRRRLADSVVVAEELWWQAMDYARLNHSTISFFDYSRPETAVSRWNR 108
Query: 167 XXXXXXKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHIYYGVWSRSESTEPFFYWL 226
KVGKGLS KAQKLA QHW+EAIDPRHRYGHNLH YY W ++++ +PFFYWL
Sbjct: 109 VSLNASKVGKGLSIVDKAQKLAFQHWIEAIDPRHRYGHNLHKYYEEWCKADAGQPFFYWL 168
Query: 227 DIGEGKEVNLDRCPRNKLQSQCVKYLGPKERQEYEVVVESGRLVYKQSGVFVHT---SDD 283
D+G G +++L+ CPR+KL+ QC++YLGP+ER+EYE V+ G++V+K +G F+HT S+
Sbjct: 169 DVGGGIDLDLNECPRSKLKQQCIRYLGPQEREEYEYVIIEGKIVHKLTGKFLHTMHGSEG 228
Query: 284 SKWIFVLSTTKALYVGQKKKGSFQHSSFLAGGAITSAGRLVVKDGILKAIWPYSGHYLPT 343
+KWIFV+ST K LY G KKKG F HSSFLAGGA +AGR++V +G+LK I YSGHY P+
Sbjct: 229 TKWIFVMSTFKKLYAGLKKKGRFHHSSFLAGGATLAAGRVIVDNGVLKTISAYSGHYRPS 288
Query: 344 EENFREFISYLQENGVDLADVKRCPMDKDDE 374
+++ F+ +L+EN V+L +V+ +D +
Sbjct: 289 DDSLDTFLGFLRENAVNLDNVEVHKASEDSD 319
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 465 NHLPCRWSTGTGPRIRCVRDYPQDLQSRALEHVNLSPRLAAAGVAPATR 513
+ L +WSTG GPRI C DYP L+++ALE VNLSP+ ++ ++P +
Sbjct: 405 HQLSLKWSTGVGPRIGCAADYPVQLRTQALEFVNLSPKYRSSRLSPTGK 453
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,530,592
Number of extensions: 471990
Number of successful extensions: 1293
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1282
Number of HSP's successfully gapped: 13
Length of query: 556
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 452
Effective length of database: 8,255,305
Effective search space: 3731397860
Effective search space used: 3731397860
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)