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Os05g0187000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Beta 2 subunit of 20S proteasome (20S proteasome beta subunit).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0111) R2 : 0.0271
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0834 (0.0234) R2dN8 : 0.035 R2N8 : 0.0271
σ : 0.209
deviance : 20.1
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C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.47 0.159 13 -0.165 0.332 0.26 -0.0766 -0.63 0.00501 20.4 21.2 4036 -- --
11.72 0.159 13 0.0108 0.339 0.234 -0.0879 -- 0.0501 20.4 20.69 4256 -- --
11.49 0.158 13 -0.163 0.331 0.26 -- -0.632 0.00578 20.4 21.2 4013 -- --
11.73 0.159 13 -0.00526 0.337 0.252 -- -- 0.046 20.4 18.7 4211 -- --
16.47 0.189 13.1 -0.443 -- 0.493 -- -2.07 -0.0407 -- 25.62 2080 -- --
13.19 0.17 13 0.109 0.341 -- -0.0917 -- 0.0987 20.6 -- -- -- --
13.21 0.17 13 0.112 0.341 -- -- -- 0.0988 20.6 -- -- -- --
17.2 0.193 13 -0.0091 -- 0.315 -- -- 0.0255 -- 19.08 2141 -- --
11.73 0.159 13 -- 0.339 0.25 -- -- 0.0467 20.4 18.64 4224 -- --
19.77 0.208 13 0.111 -- -- -- -- 0.0957 -- -- -- -- --
13.55 0.172 13 -- 0.341 -- -- -- 0.0863 20.6 -- -- -- --
14.79 0.179 13 -- -- 0.433 -- -- 0.0341 -- 24.2 628 -- --
20.1 0.209 13 -- -- -- -- -- 0.0834 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.72 humidity 90 4320 > th dose independent rect. 18 1
2 10.81 temperature 10 270 > th dose dependent rect. 4 17
6 10.95 temperature 20 1440 > th dose dependent rect. 6 1
12 11.00 wind 9 43200 > th dose dependent rect. 18 13
26 11.07 temperature 15 10 > th dose dependent rect. 6 16
42 11.11 humidity 90 4320 < th dose independent rect. 18 1
44 11.11 wind 9 43200 > th dose dependent rect. 18 7
48 11.12 temperature 20 1440 > th dose independent rect. 5 1
50 11.12 temperature 20 1440 < th dose independent rect. 3 3
54 11.12 wind 9 43200 > th dose dependent rect. 18 9
67 11.15 temperature 20 1440 > th dose independent rect. 3 3
77 11.16 wind 9 43200 > th dose dependent rect. 18 3
87 11.18 atmosphere 995 43200 > th dose independent rect. 12 2
95 11.19 wind 9 43200 > th dose independent rect. 18 3
96 11.19 wind 9 43200 < th dose independent rect. 18 3
99 11.19 atmosphere 995 43200 < th dose dependent rect. 14 1
109 11.20 atmosphere 995 43200 < th dose dependent rect. 12 4
119 11.21 temperature 20 1440 > th dose dependent rect. 1 1
120 11.21 temperature 25 1440 < th dose dependent rect. 3 1
121 11.21 temperature 20 1440 > th dose dependent rect. 1 3
128 11.22 wind 7 43200 > th dose independent rect. 6 1
135 11.22 radiation 1 43200 < th dose dependent rect. 19 5
144 11.23 atmosphere 995 43200 < th dose independent rect. 9 6
151 11.23 temperature 15 1440 > th dose dependent rect. 3 1
161 11.24 wind 9 43200 > th dose independent rect. 18 14
194 11.25 temperature 20 1440 > th dose dependent rect. 21 7
225 11.27 temperature 20 720 > th dose dependent sin 6 NA
236 11.27 temperature 10 720 > th dose dependent rect. 1 15
263 11.28 temperature 20 720 > th dose dependent rect. 1 14
272 11.29 wind 9 43200 > th dose independent rect. 18 7
299 11.30 humidity 90 4320 > th dose independent rect. 18 4
315 11.30 temperature 20 720 > th dose dependent rect. 20 17
320 11.31 atmosphere 995 43200 > th dose independent rect. 9 6
323 11.31 temperature 20 1440 > th dose dependent sin 9 NA
351 11.32 wind 9 43200 > th dose independent rect. 18 9
451 11.34 temperature 10 270 > th dose dependent rect. 17 15
459 11.35 wind 7 43200 < th dose independent rect. 6 1
525 11.36 temperature 30 270 < th dose dependent rect. 7 21
526 11.36 temperature 15 10 > th dose dependent rect. 12 23
532 11.37 wind 9 43200 < th dose independent rect. 18 7
538 11.37 wind 9 43200 < th dose independent rect. 18 15
539 11.37 temperature 20 1440 > th dose dependent rect. 21 1
560 11.37 temperature 15 90 > th dose dependent rect. 17 17
593 11.38 temperature 10 720 > th dose dependent rect. 20 20
602 11.39 radiation 30 4320 < th dose independent rect. 15 17
603 11.39 temperature 30 270 < th dose independent rect. 7 22
618 11.39 radiation 1 43200 < th dose dependent rect. 19 8
636 11.39 temperature 30 90 < th dose dependent rect. 10 19
641 11.40 temperature 20 4320 > th dose independent rect. 21 2
654 11.40 wind 9 43200 < th dose independent rect. 18 9
658 11.40 temperature 20 4320 > th dose dependent rect. 18 1
687 11.41 temperature 20 1440 > th dose independent rect. 23 2
707 11.41 humidity 90 14400 > th dose dependent rect. 23 1
737 11.41 temperature 30 10 < th dose dependent rect. 10 20
742 11.42 temperature 20 4320 < th dose independent rect. 21 2
743 11.42 temperature 20 1440 < th dose independent rect. 23 2
752 11.42 temperature 25 90 > th dose independent rect. 5 17
898 11.45 humidity 90 4320 < th dose independent rect. 17 5