Os05g0182900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0182900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.25 | 0.316 | 9.14 | -0.598 | 0.914 | -0.951 | -0.121 | 1.29 | 0.098 | 19.2 | 29.66 | 4024 | -- | -- |
| 45.11 | 0.313 | 9.12 | -0.374 | 0.899 | -0.831 | -0.157 | -- | 0.075 | 19.2 | 29.4 | 3798 | -- | -- |
| 45.05 | 0.313 | 9.15 | -0.593 | 0.913 | -0.938 | -- | 1.13 | 0.0526 | 19.2 | 29.5 | 4008 | -- | -- |
| 45.15 | 0.313 | 9.12 | -0.355 | 0.9 | -0.833 | -- | -- | 0.0748 | 19.2 | 29.4 | 3798 | -- | -- |
| 75.17 | 0.404 | 9.16 | -0.697 | -- | -1.18 | -- | 1.28 | -0.101 | -- | 29.1 | 2107 | -- | -- |
| 65.76 | 0.38 | 9.12 | -0.144 | 0.93 | -- | -0.154 | -- | 0.0772 | 19.5 | -- | -- | -- | -- |
| 65.83 | 0.38 | 9.12 | -0.14 | 0.93 | -- | -- | -- | 0.077 | 19.5 | -- | -- | -- | -- |
| 59.04 | 0.358 | 9.19 | -0.372 | -- | -0.911 | -- | -- | -0.198 | -- | 26.4 | 590 | -- | -- |
| 48.27 | 0.324 | 9.12 | -- | 0.911 | -0.765 | -- | -- | 0.117 | 19.2 | 29.5 | 3733 | -- | -- |
| 112.09 | 0.495 | 9.1 | -0.154 | -- | -- | -- | -- | 0.0624 | -- | -- | -- | -- | -- |
| 66.34 | 0.381 | 9.12 | -- | 0.931 | -- | -- | -- | 0.0926 | 19.5 | -- | -- | -- | -- |
| 62.96 | 0.37 | 9.15 | -- | -- | -0.953 | -- | -- | -0.152 | -- | 26.2 | 560 | -- | -- |
| 112.72 | 0.496 | 9.1 | -- | -- | -- | -- | -- | 0.0795 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 5 | 43.08 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 6 | 43.08 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 11 | 43.09 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 20 | 43.13 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 21 | 43.14 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 35 | 43.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 46 | 43.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 47 | 43.75 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 68 | 43.92 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 70 | 43.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 78 | 44.04 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 83 | 44.10 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 84 | 44.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 86 | 44.15 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 88 | 44.18 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 90 | 44.19 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 3 |
| 93 | 44.21 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 96 | 44.22 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 98 | 44.22 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 103 | 44.24 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 110 | 44.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 140 | 44.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 198 | 44.54 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 259 | 44.71 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 272 | 44.74 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 334 | 44.82 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 389 | 44.94 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 403 | 44.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 440 | 45.05 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 448 | 45.05 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 16 | 17 |
| 466 | 45.08 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 519 | 45.17 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 586 | 45.24 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 11 |
| 625 | 45.31 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 664 | 45.38 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 705 | 45.42 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 709 | 45.42 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 793 | 45.50 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 9 | NA |
| 816 | 45.53 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 844 | 45.55 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 846 | 45.55 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 10 | 6 |
| 867 | 45.57 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 877 | 45.58 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 911 | 45.61 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 912 | 45.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 925 | 45.63 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 948 | 45.65 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 10 | 6 |
| 950 | 45.65 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 7 | 9 |
| 954 | 45.65 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 18 | 22 |
| 972 | 45.66 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 23 | 17 |