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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0181800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.23 (0.0497) R2 : 0.202
β1 : 1.48 (0.182) R2dD : 0.124 R2D : 0.046
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.951 (0.156) R2dE : 0.0762 R2E : 0.0588
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.453 (0.111) R2dN8 : 0.0439 R2N8 : 0.045
σ : 0.917
deviance : 387.63
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 57.33
memory length : 1583
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
366.55 0.9 4.24 1.47 0.392 -0.856 -2 -1.13 0.461 7.39 57 1543 -- --
368.93 0.895 4.22 1.53 0.397 -0.939 -1.97 -- 0.446 7.34 57.42 1545 -- --
371.38 0.898 4.24 1.41 0.534 -0.908 -- -1.21 0.467 4.97 57 1521 -- --
373.77 0.9 4.23 1.47 0.526 -0.967 -- -- 0.441 4.9 56 1523 -- --
385.52 0.914 4.25 1.44 -- -0.874 -- -1.1 0.469 -- 57.58 1570 -- --
400.19 0.938 4.18 1.33 0.388 -- -2.01 -- 0.66 7.42 -- -- -- --
407.15 0.945 4.18 1.28 0.479 -- -- -- 0.658 5.24 -- -- -- --
387.63 0.917 4.23 1.48 -- -0.951 -- -- 0.453 -- 57.33 1583 -- --
429.22 0.965 4.25 -- 0.528 -0.753 -- -- 0.349 4.65 57.91 1519 -- --
419.14 0.957 4.18 1.29 -- -- -- -- 0.67 -- -- -- -- --
450.18 0.993 4.21 -- 0.501 -- -- -- 0.515 5.15 -- -- -- --
440.06 0.977 4.25 -- -- -0.844 -- -- 0.357 -- 65.55 1890 -- --
463.33 1 4.21 -- -- -- -- -- 0.526 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 354.91 precipitation 0.1 43200 > th dose dependent rect. 15 3
4 359.05 precipitation 0.1 43200 > th dose dependent rect. 17 4
6 359.22 humidity 70.0 720 > th dose independent rect. 16 4
8 359.41 precipitation 0.1 43200 > th dose dependent rect. 20 1
13 360.35 humidity 70.0 720 > th dose independent rect. 16 15
14 360.40 humidity 70.0 720 > th dose independent rect. 16 19
19 360.57 precipitation 0.1 43200 < th dose independent rect. 16 2
20 360.57 precipitation 0.1 43200 < th dose dependent rect. 16 2
22 360.92 humidity 70.0 720 > th dose independent rect. 17 11
23 360.96 precipitation 0.1 43200 > th dose independent rect. 16 2
25 361.26 humidity 60.0 720 > th dose dependent rect. 17 1
29 361.90 radiation 10.0 720 < th dose independent rect. 16 1
30 361.92 humidity 70.0 720 > th dose independent rect. 17 1
32 361.97 humidity 70.0 720 > th dose independent sin 11 NA
36 362.15 wind 9.0 14400 > th dose dependent rect. 17 19
49 362.96 atmosphere 1000.0 43200 > th dose independent rect. 23 1
50 362.96 atmosphere 1000.0 43200 < th dose independent rect. 22 1
71 363.60 wind 9.0 14400 > th dose independent rect. 17 18
82 363.91 wind 9.0 14400 > th dose dependent rect. 16 14
87 364.01 humidity 70.0 720 > th dose independent rect. 19 9
100 364.20 precipitation 0.1 43200 > th dose dependent rect. 17 7
106 364.40 wind 7.0 43200 > th dose dependent rect. 17 1
107 364.46 wind 9.0 14400 < th dose independent rect. 17 18
113 364.66 radiation 10.0 43200 > th dose independent rect. 7 7
118 364.77 radiation 20.0 43200 > th dose independent rect. 10 2
121 364.90 wind 9.0 14400 > th dose dependent sin 11 NA
126 364.94 precipitation 0.1 4320 < th dose independent rect. 14 4
127 364.94 precipitation 0.1 4320 < th dose dependent rect. 14 4
134 364.99 wind 9.0 14400 > th dose dependent rect. 20 16
135 365.01 precipitation 0.1 43200 < th dose independent rect. 17 4
136 365.01 precipitation 0.1 43200 < th dose dependent rect. 17 4
155 365.22 precipitation 0.1 43200 > th dose independent rect. 17 4
159 365.30 wind 9.0 14400 > th dose independent rect. 17 13
167 365.36 precipitation 0.1 4320 > th dose independent rect. 14 4
172 365.40 humidity 50.0 720 > th dose dependent rect. 9 13
183 365.61 radiation 20.0 43200 < th dose dependent rect. 10 1
220 365.99 radiation 10.0 43200 > th dose independent rect. 7 4
259 366.16 wind 9.0 14400 > th dose dependent rect. 17 3
264 366.20 atmosphere 1000.0 43200 > th dose independent rect. 21 8
274 366.30 wind 1.0 14400 > th dose independent rect. 20 2
289 366.44 wind 9.0 14400 > th dose independent rect. 17 9
294 366.45 wind 9.0 43200 < th dose independent rect. 14 4
296 366.46 precipitation 0.1 43200 < th dose independent rect. 19 2
297 366.46 precipitation 0.1 43200 < th dose dependent rect. 19 2
302 366.48 wind 9.0 14400 > th dose independent rect. 19 10
308 366.51 wind 9.0 43200 > th dose independent rect. 14 4
313 366.54 wind 9.0 43200 > th dose dependent rect. 14 5
331 366.71 wind 9.0 14400 < th dose independent rect. 17 13
335 366.75 wind 9.0 14400 < th dose independent rect. 17 6
338 366.78 wind 9.0 43200 > th dose independent rect. 14 16
342 366.81 wind 9.0 14400 > th dose independent sin 11 NA
345 366.83 precipitation 0.1 43200 > th dose independent rect. 20 1
376 366.99 precipitation 0.1 14400 > th dose dependent rect. 8 10
395 367.10 wind 7.0 14400 > th dose dependent rect. 20 8
397 367.13 wind 9.0 43200 < th dose independent rect. 17 1
421 367.21 wind 9.0 14400 > th dose dependent rect. 19 10
424 367.23 wind 9.0 43200 < th dose independent rect. 14 16
431 367.27 radiation 10.0 43200 > th dose independent sin 6 NA
432 367.27 wind 9.0 14400 < th dose independent rect. 19 4
442 367.30 wind 9.0 14400 > th dose independent rect. 19 7
446 367.31 wind 9.0 14400 < th dose independent rect. 17 9
448 367.31 atmosphere 1005.0 14400 < th dose dependent rect. 15 1
464 367.44 precipitation 0.1 1440 < th dose independent rect. 16 5
466 367.44 precipitation 0.1 1440 < th dose dependent rect. 16 5
479 367.50 wind 9.0 43200 < th dose independent rect. 15 7
485 367.51 precipitation 0.1 14400 > th dose dependent rect. 6 12
489 367.54 humidity 70.0 4320 < th dose independent rect. 17 2
490 367.54 wind 9.0 43200 > th dose independent rect. 15 7
492 367.54 humidity 80.0 720 > th dose independent rect. 8 14
509 367.66 wind 9.0 43200 > th dose independent rect. 14 9
512 367.67 humidity 70.0 720 < th dose independent rect. 17 18
555 367.92 wind 9.0 43200 > th dose independent rect. 17 1
591 368.03 wind 9.0 14400 < th dose independent rect. 19 9
602 368.06 wind 9.0 43200 > th dose independent sin 16 NA
618 368.09 humidity 60.0 1440 < th dose independent rect. 16 21
626 368.10 wind 9.0 43200 > th dose dependent rect. 14 16
629 368.11 wind 9.0 43200 < th dose independent rect. 11 19
646 368.15 wind 7.0 14400 > th dose dependent rect. 20 4
658 368.20 wind 9.0 43200 < th dose independent sin 16 NA
660 368.20 radiation 20.0 720 < th dose dependent rect. 16 1
720 368.39 precipitation 0.1 4320 < th dose independent rect. 9 9
723 368.39 precipitation 0.1 4320 < th dose dependent rect. 9 9
732 368.42 wind 9.0 43200 > th dose dependent rect. 11 20
760 368.52 wind 9.0 43200 < th dose independent rect. 11 12
810 368.64 humidity 60.0 1440 < th dose independent rect. 10 3
811 368.64 wind 9.0 43200 > th dose independent rect. 11 12
822 368.66 wind 9.0 43200 < th dose independent rect. 11 15
830 368.69 wind 9.0 43200 < th dose independent rect. 11 7
974 368.98 temperature 25.0 30 < th dose independent rect. 10 18
977 368.99 humidity 60.0 1440 < th dose independent rect. 11 1
979 368.99 humidity 70.0 4320 < th dose independent rect. 17 14