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Os05g0181700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.66 (0.0509) R2 : 0.368
β1 : 1.27 (0.219) R2dD : 0.0751 R2D : 0.122
β2 : 0.386 (0.133) R2dC : 0.0133 R2C : 0.0295
β3 : 1.3 (0.219) R2dE : 0.068 R2E : -0.0473
β4 : -3.04 (0.6) R2dD*C : 0.0396 R2D*C : -0.0106
β5 : 5.64 (0.737) R2dD*E : 0.14 R2D*E : 0.172
γ1 : 0.67 (0.117) R2dN8 : 0.0798 R2N8 : 0.023
σ : 0.903
deviance : 369.23
__
_____
C
peak time of C : 5.32
E
wheather : temperature
threshold : 27.46
memory length : 27
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
369.23 0.903 8.66 1.27 0.386 1.3 -3.04 5.64 0.67 5.32 27.46 27 -- --
410 0.95 8.54 2.3 0.294 1.3 -2.56 -- 0.954 7.44 27.46 27 -- --
388.29 0.925 8.64 1.42 0.445 1.13 -- 4.43 0.705 4.4 27.02 14 -- --
421.64 0.956 8.56 2.16 0.491 0.937 -- -- 0.87 4.29 27.7 8 -- --
396.59 0.933 8.63 1.47 -- 1.41 -- 4.6 0.765 -- 27.6 17 -- --
434.14 0.977 8.61 1.93 0.747 -- 0.113 -- 0.669 3.28 -- -- -- --
434.16 0.976 8.61 1.92 0.75 -- -- -- 0.668 3.39 -- -- -- --
431.52 0.967 8.55 2.27 -- 1.31 -- -- 0.951 -- 28.3 20 -- --
531.58 1.08 8.65 -- 0.766 0.0798 -- -- 0.469 3.42 27.7 8 -- --
465.83 1.01 8.61 1.96 -- -- -- -- 0.688 -- -- -- -- --
531.68 1.08 8.66 -- 0.788 -- -- -- 0.454 3.38 -- -- -- --
557.09 1.1 8.63 -- -- 0.663 -- -- 0.588 -- 28.3 20 -- --
566.68 1.11 8.66 -- -- -- -- -- 0.471 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 356.15 humidity 70 720 > th dose independent rect. 17 14
2 356.61 humidity 70 720 > th dose independent rect. 17 11
16 363.01 humidity 70 720 > th dose independent sin 12 NA
18 363.23 humidity 70 720 > th dose independent rect. 17 3
19 364.93 temperature 30 720 < th dose dependent rect. 17 4
20 364.96 wind 9 43200 > th dose independent rect. 17 15
26 365.45 temperature 30 720 < th dose independent rect. 16 15
31 365.88 wind 9 43200 > th dose independent sin 12 NA
32 365.93 temperature 30 720 < th dose independent rect. 17 8
33 366.01 temperature 30 720 < th dose dependent rect. 17 2
34 366.03 wind 7 43200 > th dose dependent rect. 17 14
36 366.19 wind 9 43200 < th dose independent rect. 17 14
42 366.37 wind 9 43200 > th dose dependent rect. 14 17
51 366.77 temperature 30 30 < th dose dependent rect. 5 23
53 366.96 wind 9 43200 < th dose independent rect. 14 16
54 366.97 wind 9 43200 < th dose independent sin 12 NA
55 366.98 temperature 30 90 < th dose dependent rect. 12 23
59 367.13 wind 9 43200 > th dose independent rect. 14 16
70 367.63 wind 9 43200 > th dose dependent sin 13 NA
78 367.74 wind 9 43200 > th dose independent rect. 14 8
85 367.94 wind 9 43200 < th dose independent rect. 14 9
104 368.68 wind 9 43200 > th dose dependent rect. 14 8
106 368.69 temperature 30 720 < th dose independent rect. 17 10
109 368.71 wind 9 43200 > th dose independent rect. 14 11
122 368.90 wind 9 43200 > th dose dependent rect. 14 6
143 369.60 wind 7 43200 > th dose dependent rect. 17 1
144 369.67 wind 9 43200 > th dose dependent rect. 14 11
150 369.72 wind 7 43200 > th dose independent rect. 17 22
162 370.02 wind 7 43200 < th dose independent rect. 17 22
184 370.59 wind 7 14400 > th dose dependent rect. 20 15
185 370.64 temperature 30 720 < th dose independent sin 13 NA
186 370.66 temperature 30 720 < th dose dependent rect. 16 9
192 370.71 temperature 30 10 < th dose dependent rect. 12 22
197 370.80 wind 7 43200 > th dose dependent rect. 17 22
205 370.96 wind 7 43200 > th dose dependent rect. 14 22
229 371.26 temperature 30 720 < th dose dependent sin 18 NA
232 371.29 wind 7 14400 < th dose independent rect. 21 1
233 371.30 wind 7 43200 > th dose dependent rect. 17 8
236 371.33 temperature 30 90 < th dose dependent rect. 17 16
243 371.46 wind 9 43200 > th dose independent rect. 16 6
244 371.47 wind 9 43200 > th dose independent rect. 14 5
247 371.48 wind 7 4320 > th dose independent rect. 17 4
257 371.57 temperature 30 30 < th dose dependent rect. 19 23
270 371.74 wind 9 43200 < th dose independent rect. 16 5
273 371.76 wind 9 43200 > th dose independent rect. 17 19
275 371.78 wind 9 43200 < th dose independent rect. 14 4
284 371.89 temperature 30 30 < th dose dependent rect. 17 23
288 371.93 wind 7 14400 > th dose dependent rect. 20 8
294 371.99 wind 5 14400 > th dose dependent rect. 6 3
296 372.01 wind 7 4320 > th dose dependent rect. 17 4
316 372.22 temperature 30 30 < th dose dependent rect. 9 23
320 372.29 temperature 30 30 < th dose dependent rect. 1 23
321 372.30 wind 7 14400 > th dose independent rect. 21 1
324 372.31 wind 7 14400 > th dose independent rect. 20 15
340 372.44 wind 7 4320 < th dose independent rect. 17 4
367 372.64 temperature 30 30 < th dose dependent no NA NA
375 372.70 temperature 15 1440 > th dose dependent rect. 17 1
385 372.74 temperature 30 720 < th dose dependent rect. 8 15
394 372.79 temperature 30 30 < th dose dependent rect. 15 23
401 372.82 wind 7 43200 > th dose independent rect. 11 23
410 372.85 wind 7 43200 > th dose independent no NA NA
411 372.85 wind 7 43200 < th dose independent no NA NA
414 372.86 wind 7 43200 > th dose independent rect. 2 23
415 372.86 wind 7 43200 < th dose independent rect. 10 23
418 372.87 wind 7 43200 < th dose independent rect. 2 23
432 372.93 wind 7 14400 < th dose independent rect. 20 15
433 372.93 wind 7 43200 < th dose independent rect. 24 23
439 372.94 wind 7 43200 > th dose independent rect. 24 23
445 372.95 wind 5 14400 > th dose dependent rect. 21 1
473 373.05 temperature 30 720 < th dose independent rect. 16 3
474 373.05 temperature 30 720 < th dose independent rect. 16 5
513 373.16 wind 7 43200 < th dose independent rect. 16 19
536 373.23 wind 7 43200 > th dose dependent rect. 9 23
549 373.27 humidity 60 720 > th dose dependent rect. 16 5
557 373.29 wind 7 43200 > th dose dependent rect. 11 19
566 373.32 wind 9 14400 > th dose independent rect. 19 7
573 373.35 wind 7 43200 < th dose independent rect. 17 1
576 373.35 wind 7 43200 > th dose dependent rect. 2 23
582 373.37 wind 7 43200 > th dose dependent no NA NA
598 373.40 wind 7 43200 > th dose dependent rect. 24 23
602 373.42 wind 7 43200 > th dose independent rect. 17 1
616 373.46 wind 7 14400 > th dose independent rect. 6 3
647 373.54 temperature 30 30 < th dose dependent rect. 7 23
684 373.69 wind 5 43200 > th dose dependent rect. 20 22
698 373.73 temperature 15 30 > th dose dependent rect. 13 23
771 373.96 wind 7 14400 < th dose independent rect. 6 3
782 374.01 humidity 60 720 > th dose dependent rect. 17 2
784 374.01 temperature 30 90 < th dose dependent rect. 15 20
808 374.08 temperature 10 30 > th dose dependent rect. 23 23
849 374.28 temperature 30 30 < th dose dependent rect. 3 23
878 374.39 temperature 20 90 > th dose dependent rect. 17 22
881 374.41 temperature 30 30 < th dose dependent rect. 21 23
906 374.48 wind 7 43200 < th dose independent rect. 22 18
927 374.53 wind 9 14400 < th dose independent rect. 19 5
938 374.56 wind 7 43200 < th dose independent rect. 24 16
985 374.69 radiation 10 720 < th dose independent rect. 16 1
998 374.73 wind 7 43200 < th dose independent rect. 2 14