Os05g0179100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DVL family protein.
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Os05g0179100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DVL family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.7 | 0.577 | 7.99 | -2.07 | 0.682 | 1.88 | -0.625 | 7.74 | -0.496 | 21.6 | 0.17 | 4283 | -- | -- |
| 162.06 | 0.597 | 7.79 | -1 | 0.77 | 1.02 | 1.48 | -- | -0.342 | 14 | 18.01 | 9990 | -- | -- |
| 151.48 | 0.573 | 7.99 | -2.04 | 0.743 | 1.92 | -- | 7.89 | -0.498 | 21.6 | 0.1667 | 4258 | -- | -- |
| 170.14 | 0.612 | 7.79 | -0.962 | 0.694 | 0.922 | -- | -- | -0.333 | 14.5 | 18.01 | 9990 | -- | -- |
| 175.85 | 0.618 | 7.99 | -2.08 | -- | 1.92 | -- | 8.04 | -0.522 | -- | 0.009971 | 4311 | -- | -- |
| 181.79 | 0.632 | 7.81 | -1.03 | 0.585 | -- | -1.05 | -- | -0.339 | 21.4 | -- | -- | -- | -- |
| 185.3 | 0.637 | 7.81 | -0.984 | 0.606 | -- | -- | -- | -0.335 | 20.8 | -- | -- | -- | -- |
| 183.9 | 0.634 | 7.79 | -0.982 | -- | 0.532 | -- | -- | -0.345 | -- | 22.63 | 20361 | -- | -- |
| 194.26 | 0.653 | 7.77 | -- | 0.608 | 0.918 | -- | -- | -0.226 | 15.5 | 31.98 | 3019 | -- | -- |
| 206.2 | 0.671 | 7.79 | -0.984 | -- | -- | -- | -- | -0.34 | -- | -- | -- | -- | -- |
| 210.81 | 0.679 | 7.78 | -- | 0.609 | -- | -- | -- | -0.225 | 20.7 | -- | -- | -- | -- |
| 208.64 | 0.675 | 7.77 | -- | -- | 0.602 | -- | -- | -0.236 | -- | 31.98 | 3019 | -- | -- |
| 231.76 | 0.711 | 7.77 | -- | -- | -- | -- | -- | -0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.89 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 146.30 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 4 | 146.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 6 | 146.66 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 7 | 146.72 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 8 | 146.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 11 | 146.83 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 12 | 146.83 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 34 | 147.02 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 36 | 147.03 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 49 | 147.16 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 51 | 147.17 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 52 | 147.18 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 54 | 147.29 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 57 | 147.49 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 71 | 147.88 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 77 | 148.12 | humidity | 70 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 81 | 148.26 | radiation | 40 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 89 | 148.39 | radiation | 40 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 96 | 148.46 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 108 | 148.48 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 110 | 148.51 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 122 | 148.72 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 124 | 148.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 134 | 148.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 153 | 149.00 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 159 | 149.05 | radiation | 1 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 166 | 149.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 168 | 149.17 | humidity | 90 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 191 | 149.36 | temperature | 20 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 193 | 149.38 | temperature | 20 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 204 | 149.47 | radiation | 40 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 222 | 149.48 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 223 | 149.48 | temperature | 20 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 249 | 149.54 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 260 | 149.56 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 292 | 149.62 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 293 | 149.62 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 295 | 149.63 | temperature | 20 | 43200 | < th | dose dependent | sin | 10 | NA |
| 309 | 149.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 316 | 149.66 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 334 | 149.69 | temperature | 20 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 346 | 149.71 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 350 | 149.72 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 352 | 149.72 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 369 | 149.76 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 466 | 149.89 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 489 | 149.92 | temperature | 20 | 43200 | < th | dose independent | sin | 18 | NA |
| 647 | 150.12 | temperature | 20 | 43200 | < th | dose dependent | no | NA | NA |
| 660 | 150.15 | temperature | 20 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 676 | 150.17 | temperature | 20 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 685 | 150.18 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 19 |
| 719 | 150.22 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 23 |
| 734 | 150.25 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 765 | 150.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 782 | 150.32 | temperature | 20 | 43200 | > th | dose independent | sin | 18 | NA |
| 813 | 150.35 | temperature | 20 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 824 | 150.36 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 834 | 150.37 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 852 | 150.39 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 873 | 150.41 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 886 | 150.42 | humidity | 50 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 905 | 150.43 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 908 | 150.43 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 932 | 150.46 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 947 | 150.47 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 14 |