Os05g0176300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0176300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.62 | 0.452 | 2.98 | -0.322 | 0.118 | -0.483 | -0.396 | 2.22 | 0.278 | 7.23 | 1 | 15 | -- | -- |
| 96.96 | 0.459 | 2.96 | -0.236 | 0.135 | -0.324 | -0.578 | -- | 0.299 | 6.72 | 1 | 14 | -- | -- |
| 92.98 | 0.449 | 2.98 | -0.339 | 0.117 | -0.508 | -- | 2.34 | 0.277 | 7.92 | 1.054 | 16 | -- | -- |
| 97.64 | 0.46 | 2.96 | -0.244 | 0.145 | -0.324 | -- | -- | 0.305 | 7.37 | 1 | 14 | -- | -- |
| 93.69 | 0.451 | 2.99 | -0.345 | -- | -0.548 | -- | 2.4 | 0.278 | -- | 1.061 | 16 | -- | -- |
| 99.24 | 0.467 | 2.96 | -0.2 | 0.216 | -- | -0.571 | -- | 0.297 | 6 | -- | -- | -- | -- |
| 100.03 | 0.468 | 2.96 | -0.204 | 0.213 | -- | -- | -- | 0.299 | 6.26 | -- | -- | -- | -- |
| 98.63 | 0.463 | 2.96 | -0.24 | -- | -0.379 | -- | -- | 0.308 | -- | 1.022 | 14 | -- | -- |
| 99.15 | 0.464 | 2.95 | -- | 0.143 | -0.298 | -- | -- | 0.328 | 7.45 | 1.1 | 14 | -- | -- |
| 102.38 | 0.473 | 2.96 | -0.199 | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
| 101.13 | 0.47 | 2.95 | -- | 0.21 | -- | -- | -- | 0.322 | 6.32 | -- | -- | -- | -- |
| 100.19 | 0.466 | 2.96 | -- | -- | -0.348 | -- | -- | 0.332 | -- | 1.012 | 14 | -- | -- |
| 103.43 | 0.475 | 2.96 | -- | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.22 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 2 | 86.23 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 86.44 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 10 | 86.56 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 12 | 86.56 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 17 | 86.60 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 19 | 86.60 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 86.60 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 24 | 86.60 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 26 | 86.60 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 31 | 86.60 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 86.60 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 33 | 86.60 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 38 | 86.60 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 86.69 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 47 | 86.90 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 48 | 86.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 50 | 87.01 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 87.56 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 60 | 87.57 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 61 | 87.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 64 | 87.57 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 68 | 87.57 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 77 | 87.57 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 78 | 87.57 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 98 | 87.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 102 | 87.57 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 158 | 88.35 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 9 | 2 |
| 160 | 88.41 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 163 | 88.50 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 193 | 88.56 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 4 |
| 199 | 88.58 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 203 | 88.62 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 240 | 88.82 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 260 | 88.84 | humidity | 60.0 | 30 | < th | dose dependent | rect. | 16 | 18 |
| 262 | 88.86 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 288 | 88.86 | humidity | 60.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 318 | 88.87 | humidity | 60.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 373 | 88.87 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 535 | 88.92 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 579 | 88.99 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 590 | 89.06 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 596 | 89.11 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 613 | 89.18 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 623 | 89.25 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 705 | 89.38 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 706 | 89.38 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 764 | 89.55 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 770 | 89.68 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 772 | 89.69 | wind | 1.0 | 10 | > th | dose independent | sin | 19 | NA |
| 825 | 89.98 | wind | 1.0 | 10 | < th | dose independent | sin | 20 | NA |
| 873 | 90.17 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 879 | 90.21 | radiation | 40.0 | 30 | > th | dose independent | rect. | 14 | 21 |
| 880 | 90.22 | radiation | 40.0 | 30 | > th | dose independent | rect. | 9 | 2 |
| 981 | 90.41 | radiation | 40.0 | 10 | > th | dose dependent | sin | 11 | NA |