Os05g0161400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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Os05g0161400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.6 | 0.288 | 9.74 | -0.222 | 0.315 | 1.23 | 0.923 | -1.52 | 0.0077 | 9.09 | 19.82 | 1473 | -- | -- |
| 39.1 | 0.291 | 9.69 | 0.174 | 0.286 | 1.53 | 1.09 | -- | 0.123 | 8.8 | 14.8 | 1502 | -- | -- |
| 40.56 | 0.297 | 9.75 | -0.237 | 0.315 | 1.23 | -- | -1.65 | 0.00116 | 9.18 | 20 | 1454 | -- | -- |
| 41.74 | 0.303 | 9.69 | 0.296 | 0.661 | 1.99 | -- | -- | 0.117 | 4.14 | 15.28 | 1417 | -- | -- |
| 46.18 | 0.316 | 9.75 | -0.196 | -- | 1.21 | -- | -1.56 | 0.0104 | -- | 19.98 | 1480 | -- | -- |
| 80.02 | 0.419 | 9.63 | 0.665 | 0.304 | -- | 0.95 | -- | 0.407 | 8.58 | -- | -- | -- | -- |
| 82.93 | 0.426 | 9.63 | 0.695 | 0.304 | -- | -- | -- | 0.407 | 8.35 | -- | -- | -- | -- |
| 47.64 | 0.321 | 9.7 | 0.205 | -- | 1.53 | -- | -- | 0.125 | -- | 14.16 | 1474 | -- | -- |
| 43.83 | 0.31 | 9.7 | -- | 0.702 | 2.12 | -- | -- | 0.067 | 4.03 | 15.28 | 1417 | -- | -- |
| 88.08 | 0.439 | 9.63 | 0.696 | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
| 95.65 | 0.457 | 9.64 | -- | 0.308 | -- | -- | -- | 0.329 | 8.19 | -- | -- | -- | -- |
| 47.76 | 0.322 | 9.73 | -- | -- | 1.49 | -- | -- | 0.00931 | -- | 12.58 | 7252 | -- | -- |
| 100.87 | 0.469 | 9.65 | -- | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 12 | 36.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 21 | 36.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 24 | 36.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 29 | 37.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 54 | 37.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 65 | 37.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 101 | 37.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 102 | 37.56 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 112 | 37.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 126 | 37.63 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 137 | 37.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 147 | 37.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 151 | 37.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 153 | 37.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 154 | 37.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 336 | 37.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 405 | 38.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 410 | 38.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 415 | 38.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 418 | 38.07 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 501 | 38.16 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 511 | 38.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 701 | 38.32 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |