Os05g0160000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ferric leghemoglobin reductase.
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Os05g0160000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ferric leghemoglobin reductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.39 | 0.246 | 9.1 | 0.426 | 0.466 | 0.808 | 0.385 | -0.483 | 0.033 | 8.88 | 24.77 | 310 | -- | -- |
| 27.69 | 0.245 | 9.11 | 0.354 | 0.46 | 0.839 | 0.417 | -- | 0.0219 | 8.88 | 24.59 | 335 | -- | -- |
| 27.84 | 0.246 | 9.11 | 0.425 | 0.472 | 0.804 | -- | -0.426 | 0.0249 | 8.63 | 24.6 | 310 | -- | -- |
| 28.04 | 0.247 | 9.11 | 0.359 | 0.463 | 0.854 | -- | -- | 0.0102 | 8.51 | 24.4 | 350 | -- | -- |
| 33.79 | 0.271 | 9.1 | 0.568 | -- | 1.12 | -- | -0.848 | 0.0652 | -- | 34.37 | 595 | -- | -- |
| 38.08 | 0.289 | 9.15 | 0.139 | 0.52 | -- | 0.231 | -- | -0.146 | 8.16 | -- | -- | -- | -- |
| 38.22 | 0.289 | 9.15 | 0.145 | 0.522 | -- | -- | -- | -0.147 | 8.02 | -- | -- | -- | -- |
| 34.18 | 0.272 | 9.12 | 0.408 | -- | 1.07 | -- | -- | 0.05 | -- | 30.62 | 613 | -- | -- |
| 31.09 | 0.26 | 9.13 | -- | 0.47 | 0.71 | -- | -- | -0.0481 | 8.35 | 24.4 | 360 | -- | -- |
| 53.09 | 0.34 | 9.16 | 0.15 | -- | -- | -- | -- | -0.14 | -- | -- | -- | -- | -- |
| 38.77 | 0.291 | 9.15 | -- | 0.523 | -- | -- | -- | -0.163 | 8 | -- | -- | -- | -- |
| 38.39 | 0.289 | 9.14 | -- | -- | 0.95 | -- | -- | -0.0416 | -- | 42.21 | 611 | -- | -- |
| 53.68 | 0.342 | 9.17 | -- | -- | -- | -- | -- | -0.157 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 9 | 27.12 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 14 | 27.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 15 | 27.27 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 24 | 27.36 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 30 | 27.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 31 | 27.45 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 35 | 27.49 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 44 | 27.54 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 88 | 27.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 101 | 27.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 132 | 27.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 20 |
| 148 | 27.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 168 | 28.03 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 191 | 28.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 235 | 28.19 | temperature | 25 | 270 | < th | dose dependent | sin | 8 | NA |
| 236 | 28.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 238 | 28.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 252 | 28.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 291 | 28.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 21 |
| 332 | 28.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 344 | 28.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 420 | 28.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 682 | 28.77 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 693 | 28.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 16 |
| 792 | 28.89 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 793 | 28.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 801 | 28.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 817 | 28.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 845 | 28.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 890 | 28.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 982 | 29.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |